RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 GPR4P46093 362 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
CDK9-203ENST00000480353 FMODQ06828 376 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 THEM4Q5T1C6 240 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 C10orf128Q5T292 105 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 C6orf52Q5T4I8 152 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 C8orf82Q6P1X6 216 aaPredicted RBP13.22□□□□□ -0.29
CDK9-203ENST00000480353 MBOAT2Q6ZWT7 520 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 MEX3DQ86XN8 651 aaKnown RBP13.22□□□□□ -0.29
CDK9-203ENST00000480353 ZCCHC24Q8N2G6 241 aaKnown RBP13.22□□□□□ -0.29
CDK9-203ENST00000480353 OR13C2Q8NGS9 318 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 FGFBP3Q8TAT2 258 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 C11orf40Q8WZ69 217 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 HDAC2Q92769 488 aaKnown RBP13.22□□□□□ -0.29
CDK9-203ENST00000480353 ZNF75AQ96N20 296 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 MYLK2Q9H1R3 596 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 ABCD2Q9UBJ2 740 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 EIF3KQ9UBQ5 218 aaKnown RBP13.22□□□□□ -0.29
CDK9-203ENST00000480353 AURKCQ9UQB9 309 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 ENPP4Q9Y6X5 453 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 ZANQ9Y493 2812 aa13.22□□□□□ -0.29
CDK9-203ENST00000480353 TMEM129A0AVI4 362 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 MT-ND5P03915 603 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 H1F0P07305 194 aaKnown RBP13.21□□□□□ -0.29
CDK9-203ENST00000480353 ZNF16P17020 682 aaPredicted RBP13.21□□□□□ -0.29
CDK9-203ENST00000480353 ITGA2P17301 1181 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 TCN1P20061 433 aaPredicted RBP13.21□□□□□ -0.29
CDK9-203ENST00000480353 DRD4P21917 467 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 PCBD1P61457 104 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 ZBED5Q49AG3 693 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 ZNF584Q8IVC4 421 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 ALDH16A1Q8IZ83 802 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 RNF148Q8N7C7 305 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 SYNPRQ8TBG9 265 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 BCL2L14Q9BZR8 327 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 BPESC1Q9GZL8 116 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 ANKRD19PQ9H560 264 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 NMNAT1Q9HAN9 279 aaPredicted RBP13.21□□□□□ -0.29
CDK9-203ENST00000480353 MAN2C1Q9NTJ4 1040 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 KCNS2Q9ULS6 477 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 V9GYQ6 96 aa13.21□□□□□ -0.29
CDK9-203ENST00000480353 A0A087WUU8 490 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 LOC100289279A0A1B0GTE1 492 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 FFAR1O14842 300 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 DCTN3O75935 186 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 STAMBPO95630 424 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 IGHMP01871 453 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 TSPAN19P0C672 248 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 IGHV4-31P0DP07 118 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 RHCEP18577 417 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 ALDH3B1P43353 468 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 CHN2P52757 468 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 KLF3P57682 345 aaPredicted RBP13.2□□□□□ -0.3
CDK9-203ENST00000480353 ERVK-25P63136 954 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 FXNQ16595 210 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 MOGQ16653 247 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 ALKBH6Q3KRA9 238 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 PABPC1L2AQ5JQF8 200 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 FAM166AQ6J272 317 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 TMEM154Q6P9G4 183 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 TBPL2Q6SJ96 375 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 FAM46AQ96IP4 442 aaKnown RBP13.2□□□□□ -0.3
CDK9-203ENST00000480353 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 TSPAN32Q96QS1 320 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 SEPHS2Q99611 448 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 BEX2Q9BXY8 128 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 SHARPINQ9H0F6 387 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 CHODLQ9H9P2 273 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 NDE1Q9NXR1 346 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 TAAR3PQ9P1P4 343 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 CDC42EP3Q9UKI2 254 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 ARL2BPQ9Y2Y0 163 aa13.2□□□□□ -0.3
CDK9-203ENST00000480353 A0A096LNT2 108 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 VWC2LB2RUY7 222 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 TPD52L2O43399 206 aaKnown RBP13.19□□□□□ -0.3
CDK9-203ENST00000480353 ZNF32P17041 273 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 STOMP27105 288 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 APEX1P27695 318 aaKnown RBP13.19□□□□□ -0.3
CDK9-203ENST00000480353 GCH1P30793 250 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 GDI2P50395 445 aaKnown RBP13.19□□□□□ -0.3
CDK9-203ENST00000480353 ZNF133P52736 654 aaPredicted RBP13.19□□□□□ -0.3
CDK9-203ENST00000480353 SMIM11AP58511 58 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 MAD2L1BPQ15013 274 aaPredicted RBP13.19□□□□□ -0.3
CDK9-203ENST00000480353 SAMD4BQ5PRF9 694 aaKnown RBP13.19□□□□□ -0.3
CDK9-203ENST00000480353 SLC25A47Q6Q0C1 308 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 C16orf89Q6UX73 402 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 LRP11Q86VZ4 500 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 PRIMA1Q86XR5 153 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 ZNF786Q8N393 782 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 OR1J1Q8NGS3 322 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 ZNF519Q8TB69 540 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 ZNF570Q96NI8 536 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 RERGLQ9H628 205 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 DCAF13Q9NV06 445 aaKnown RBP13.19□□□□□ -0.3
CDK9-203ENST00000480353 SLCO1C1Q9NYB5 712 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 LPAR3Q9UBY5 353 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 TAGLN3Q9UI15 199 aa13.19□□□□□ -0.3
CDK9-203ENST00000480353 MAGEL2Q9UJ55 1249 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms