RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 RBM34P42696 430 aaKnown RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 OR1E2P47887 323 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF81P51508 661 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 SEC24CP53992 1094 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 DVL1P1P54792 670 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TMEM33P57088 247 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 PCBD1P61457 104 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ST3GAL3Q11203 375 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 PIN1Q13526 163 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 RIN1Q13671 783 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 SELPLGQ14242 412 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TRIP10Q15642 601 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF718Q3SXZ3 478 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ALG10Q5BKT4 473 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 RABL3Q5HYI8 236 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 AVPI1Q5T686 147 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 METTL21CQ5VZV1 264 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 NANOGP8Q6NSW7 305 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 RBMS3Q6XE24 437 aaKnown RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF730Q6ZMV8 503 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ARPINQ7Z6K5 226 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 PTOV1Q86YD1 416 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 MICU2Q8IYU8 434 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 BPIFB2Q8N4F0 458 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 DPP10Q8N608 796 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 C3orf56Q8N813 242 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 OR2T12Q8NG77 320 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 OR1J1Q8NGS3 322 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 PFN4Q8NHR9 129 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ABHD4Q8TB40 342 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF519Q8TB69 540 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ST7LQ8TDW4 575 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TSPEARQ8WU66 669 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TMEM255BQ8WV15 326 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 RAB1CQ92928 201 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 MCHR2Q969V1 340 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 FAM162AQ96A26 154 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TAMM41Q96BW9 452 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 LRRC58Q96CX6 371 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 BOD1Q96IK1 185 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 LRRC37BQ96QE4 947 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF347Q96SE7 839 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 POLR2J2Q9GZM3 115 aaKnown RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 POLR2J3Q9H1A7 115 aaKnown RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 KRCC1Q9NPI7 259 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF275Q9NSD4 429 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 HIF1ANQ9NWT6 349 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 RIMS3Q9UJD0 308 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 MGAM2Q2M2H8 2515 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TRBV5-3A0A0A0MS03 114 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 A6NIZ1 184 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 EFCAB9A8MZ26 197 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 FAM157AC9JC47 383 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 SLC2A10O95528 541 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ABHD16AO95870 558 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 CLPTM1O96005 669 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 NPPAP01160 153 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 HPXP02790 462 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 MSMBP08118 114 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 PGA4P0DJD7 388 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 PGA3P0DJD8 388 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF35P13682 527 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 GSTM3P21266 225 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 STOMP27105 288 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 CDAP32320 146 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 YAP1P46937 504 aaKnown RBP6.07□□□□□ -1.44
COL17A1-205ENST00000480127 UCP2P55851 309 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 PCBP3P57721 371 aaKnown RBP6.07□□□□□ -1.44
COL17A1-205ENST00000480127 RAP1BP61224 184 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 RAP1AP62834 184 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ERVK-25P63136 954 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 SLC3A1Q07837 685 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ZP4Q12836 540 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 KRT72Q14CN4 511 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 CYBRD1Q53TN4 286 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 PABPC1L2AQ5JQF8 200 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ACSM5Q6NUN0 579 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 C1orf94Q6P1W5 598 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 USP51Q70EK9 711 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ZER1Q7Z7L7 766 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.07□□□□□ -1.44
COL17A1-205ENST00000480127 OAFQ86UD1 273 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 RETREG3Q86VR2 466 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 LRP11Q86VZ4 500 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 GPR32P1Q8NGA4 272 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 OR8J3Q8NGG0 315 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 OR51A7Q8NH64 312 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 AKR7LQ8NHP1 331 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 FNDC8Q8TC99 324 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 FAM216AQ8WUB2 273 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 C10orf82Q8WW14 230 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 CCL17Q92583 94 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 GCDHQ92947 438 aaPredicted RBP6.07□□□□□ -1.44
COL17A1-205ENST00000480127 TMEM54Q969K7 222 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 TMEM186Q96B77 213 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 BPIFA2Q96DR5 249 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ELMOD3Q96FG2 381 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 JMJD8Q96S16 334 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 WFDC6Q9BQY6 131 aa6.07□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF385DQ9H6B1 395 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms