RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 TRAPPC13A5PLN9 417 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 HTR3EA5X5Y0 456 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 C11orf98E9PRG8 122 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 RNF13O43567 381 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 HIST1H2ABP04908 130 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 LCKP06239 509 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 FAM157BP0CG42 384 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 HKR1P10072 659 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 TUBG1P23258 451 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 CPT2P23786 658 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 MMP15P51511 669 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 ZNF718Q3SXZ3 478 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 RUNDC3AQ59EK9 446 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 ENTPD8Q5MY95 495 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 METTL21CQ5VZV1 264 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 SHISA2Q6UWI4 295 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 USP51Q70EK9 711 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 HIST3H2AQ7L7L0 130 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 RBM15BQ8NDT2 890 aaKnown RBP11.3□□□□□ -0.6
ABCF1-206ENST00000479542 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 OR6T1Q8NGN1 323 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 ADAMTS16Q8TE57 1224 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 TSPEARQ8WU66 669 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 RASSF5Q8WWW0 418 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 HIST1H2ACQ93077 130 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 TSPAN32Q96QS1 320 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 CPPED1Q9BRF8 314 aaPredicted RBP11.3□□□□□ -0.6
ABCF1-206ENST00000479542 TMEM120AQ9BXJ8 343 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 POLR2J2Q9GZM3 115 aaKnown RBP11.3□□□□□ -0.6
ABCF1-206ENST00000479542 POLR2J3Q9H1A7 115 aaKnown RBP11.3□□□□□ -0.6
ABCF1-206ENST00000479542 TUBG2Q9NRH3 451 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.3□□□□□ -0.6
ABCF1-206ENST00000479542 OPN4Q9UHM6 478 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 LEF1Q9UJU2 399 aaPredicted RBP11.3□□□□□ -0.6
ABCF1-206ENST00000479542 ZDHHC8Q9ULC8 765 aa11.3□□□□□ -0.6
ABCF1-206ENST00000479542 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 M0QX08 132 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 CDC14BO60729 498 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 FOXH1O75593 365 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 UBOX5O94941 541 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 CH25HO95992 272 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 THY1P04216 161 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 CD55P08174 381 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 NR2C1P13056 603 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 DRD4P21917 467 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 APLNRP35414 380 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 ZNF81P51508 661 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 UBA52P62987 128 aaKnown RBP11.29□□□□□ -0.6
ABCF1-206ENST00000479542 MVKQ03426 396 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 NPTX1Q15818 432 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 CGB2Q6NT52 195 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 PATL1Q86TB9 770 aaKnown RBP11.29□□□□□ -0.6
ABCF1-206ENST00000479542 PTOV1Q86YD1 416 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 BPIFB2Q8N4F0 458 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 DPP10Q8N608 796 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 GPR32P1Q8NGA4 272 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 FNDC8Q8TC99 324 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 POP5Q969H6 163 aaKnown RBP11.29□□□□□ -0.6
ABCF1-206ENST00000479542 MARS2Q96GW9 593 aaKnown RBP11.29□□□□□ -0.6
ABCF1-206ENST00000479542 POM121L2Q96KW2 1035 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 GPA33Q99795 319 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 WACQ9BTA9 647 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 KCNN2Q9H2S1 579 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 C7orf69Q9H7B7 122 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 ESM1Q9NQ30 184 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 DDX28Q9NUL7 540 aaKnown RBP11.29□□□□□ -0.6
ABCF1-206ENST00000479542 FGFR1OP2Q9NVK5 253 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 EIF3KQ9UBQ5 218 aaKnown RBP11.29□□□□□ -0.6
ABCF1-206ENST00000479542 NDUFAF1Q9Y375 327 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 TRRAPQ9Y4A5 3859 aa11.29□□□□□ -0.6
ABCF1-206ENST00000479542 ANGPT2O15123 496 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 SERPINI2O75830 405 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 PRSS23O95084 383 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
ABCF1-206ENST00000479542 ACADSP16219 412 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 STOMP27105 288 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 GCH1P30793 250 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 RBM34P42696 430 aaKnown RBP11.28□□□□□ -0.6
ABCF1-206ENST00000479542 DAP3P51398 398 aaKnown RBP11.28□□□□□ -0.6
ABCF1-206ENST00000479542 CLRN1P58418 232 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 TAF11Q15544 211 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 ZMAT1Q5H9K5 638 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 INTS11Q5TA45 600 aaKnown RBP11.28□□□□□ -0.6
ABCF1-206ENST00000479542 FAM27BQ5VT28 67 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 THSD4Q6ZMP0 1018 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 DOK3Q7L591 496 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 DHDDSQ86SQ9 333 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 SMYD1Q8NB12 490 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 NOXO1Q8NFA2 376 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 OR1J1Q8NGS3 322 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 LRRC58Q96CX6 371 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
ABCF1-206ENST00000479542 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
ABCF1-206ENST00000479542 A0A1W2PRG6 482 aa11.27□□□□□ -0.61
ABCF1-206ENST00000479542 PLSCR5A0PG75 271 aa11.27□□□□□ -0.61
ABCF1-206ENST00000479542 POM121CA8CG34 1229 aa11.27□□□□□ -0.61
ABCF1-206ENST00000479542 CLDN34H7C241 214 aa11.27□□□□□ -0.61
ABCF1-206ENST00000479542 M0R3H8 397 aa11.27□□□□□ -0.61
ABCF1-206ENST00000479542 TMPRSS2O15393 492 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms