RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 C9orf135Q5VTT2 229 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 FBXW9Q5XUX1 488 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 FJX1Q86VR8 437 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 GID4Q8IVV7 300 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 ZNF100Q8IYN0 542 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 GPR137CQ8N3F9 429 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 PROKR2Q8NFJ6 384 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 OR4F15Q8NGB8 312 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 C11orf40Q8WZ69 217 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 RNFT2Q96EX2 444 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 CCDC120Q96HB5 630 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 RBP7Q96R05 134 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 ZNF649Q9BS31 505 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 SFXN3Q9BWM7 321 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 POLE4Q9NR33 117 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 PARPBPQ9NWS1 579 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 HAO2Q9NYQ3 351 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 TAS2R16Q9NYV7 291 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 ZNF224Q9NZL3 707 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 JKAMPQ9P055 326 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 COPS3Q9UNS2 423 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 EXOGQ9Y2C4 368 aaKnown RBP11.52□□□□□ -0.57
CHD3-210ENST00000479080 KLHDC2Q9Y2U9 406 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 COMMD3-BMI1R4GMX3 469 aa11.52□□□□□ -0.57
CHD3-210ENST00000479080 ZNF503-AS2A6NEH8 195 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 SLC22A31A6NKX4 558 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 PYCARD-AS1I3L0S3 204 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 CCL21O00585 134 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 FAM20BO75063 409 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 SBK2P0C263 348 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 CCDC159P0C7I6 412 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 COX5AP20674 150 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 CRABP1P29762 137 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 NAA10P41227 235 aaPredicted RBP11.51□□□□□ -0.57
CHD3-210ENST00000479080 HCCSP53701 268 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 CDH15P55291 814 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 ARF1P84077 181 aaKnown RBP11.51□□□□□ -0.57
CHD3-210ENST00000479080 FAPQ12884 760 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 ENDOGQ14249 297 aaKnown RBP11.51□□□□□ -0.57
CHD3-210ENST00000479080 KCNMB1Q16558 191 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 ZNF627Q7L945 461 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 POMGNT2Q8NAT1 580 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 OR51G2Q8NGK0 314 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 OR52I1Q8NGK6 324 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 OR6K6Q8NGW6 343 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 FGFBP3Q8TAT2 258 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 FNDC8Q8TC99 324 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 AMELYQ99218 206 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 DUSP21Q9H596 190 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 EMC7Q9NPA0 242 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 TMEM38BQ9NVV0 291 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 WARS2Q9UGM6 360 aaKnown RBP11.51□□□□□ -0.57
CHD3-210ENST00000479080 PROCRQ9UNN8 238 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 MOKQ9UQ07 419 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 MYRFQ9Y2G1 1151 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 FREM1Q5H8C1 2179 aa11.51□□□□□ -0.57
CHD3-210ENST00000479080 A0A1W2PPL8 197 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 HSPB2A8KAH6 182 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 SMIM18P0DKX4 95 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 PIPP12273 146 aaPredicted RBP11.5□□□□□ -0.57
CHD3-210ENST00000479080 LAP3P28838 519 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 CCKARP32238 428 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 CD79BP40259 229 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 MTNR1AP48039 350 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 CHN2P52757 468 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 RPS7P62081 194 aaKnown RBP11.5□□□□□ -0.57
CHD3-210ENST00000479080 MRPS34P82930 218 aaKnown RBP11.5□□□□□ -0.57
CHD3-210ENST00000479080 HSF2Q03933 536 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 TSC22D1Q15714 1073 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 STK11Q15831 433 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 HSPB2Q16082 182 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 PCK2Q16822 640 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 RBM48Q5RL73 367 aaKnown RBP11.5□□□□□ -0.57
CHD3-210ENST00000479080 KLHL24Q6TFL4 600 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 Q6ZT83 130 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 SSX6Q7RTT6 188 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 CDC20BQ86Y33 519 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 GLB1L2Q8IW92 636 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 RND1Q92730 232 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 Q96MT0 163 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 FOXB1Q99853 325 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 RBM24Q9BX46 236 aaKnown RBP11.5□□□□□ -0.57
CHD3-210ENST00000479080 NOX3Q9HBY0 568 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 FGF20Q9NP95 211 aaPredicted RBP11.5□□□□□ -0.57
CHD3-210ENST00000479080 ERVK-18Q9QC07 812 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 LHFPL6Q9Y693 200 aa11.5□□□□□ -0.57
CHD3-210ENST00000479080 FLNBO75369 2602 aaKnown RBP11.5□□□□□ -0.57
CHD3-210ENST00000479080 NCOA6Q14686 2063 aaPredicted RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 OR6C65A6NJZ3 312 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 ZNF99A8MXY4 864 aaPredicted RBP11.49□□□□□ -0.57
CHD3-210ENST00000479080 ZNF587BE7ETH6 402 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 LRRTM2O43300 516 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 IGHA1P01876 353 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 MT-ND2P03891 347 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 B4GALT1P15291 398 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 BMP5P22003 454 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 MPGP29372 298 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 CASP6P55212 293 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 ZNF85Q03923 595 aa11.49□□□□□ -0.57
CHD3-210ENST00000479080 TMED1Q13445 227 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms