RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 RANGRFQ9HD47 186 aaPredicted RBP12.96□□□□□ -0.34
NPHP4-208ENST00000478423 IL20Q9NYY1 176 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 LRFN1Q9P244 771 aa12.96□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF587BE7ETH6 402 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
NPHP4-208ENST00000478423 SELENBP1Q13228 472 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 RBMS2Q15434 407 aaKnown RBP12.95□□□□□ -0.34
NPHP4-208ENST00000478423 ELP2Q6IA86 826 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 TMEM81Q6P7N7 255 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 ABI3BPQ7Z7G0 1075 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF695Q8IW36 515 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 RDH10Q8IZV5 341 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 CD300LFQ8TDQ1 290 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 MUCL1Q96DR8 90 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 QDPRP09417 244 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 IL9P15248 144 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 TPBGQ13641 420 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 Q6ZTK2 550 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 LANCL3Q6ZV70 420 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 SIAH3Q8IW03 269 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 DCUN1D4Q92564 292 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 MICU1Q9BPX6 476 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 ING1Q9UK53 422 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-208ENST00000478423 RFPL3O75679 317 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 FOLR1P15328 257 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 SOX18P35713 384 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 MAP2K6P52564 334 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 SMRP1Q8NCR6 262 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 OR1N1Q8NGS0 311 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 FNDC9Q8TBE3 224 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 SPIN2AQ99865 258 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 SPIN2BQ9BPZ2 258 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 B3GALT5Q9Y2C3 310 aa12.95□□□□□ -0.34
NPHP4-208ENST00000478423 GREM1O60565 184 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 WISP3O95389 354 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-208ENST00000478423 FABP5Q01469 135 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 GPR176Q14439 515 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 GTPBP8Q8N3Z3 284 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-208ENST00000478423 SNIP1Q8TAD8 396 aaKnown RBP12.94□□□□□ -0.34
NPHP4-208ENST00000478423 PIGTQ969N2 578 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 TXNDC15Q96J42 360 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 LRFN5Q96NI6 719 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 ARHGDIGQ99819 225 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 MENTQ9BUN1 341 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 FBXO34Q9NWN3 711 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 HRH3Q9Y5N1 445 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 TMEM82A0PJX8 343 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 TRABD2BA6NFA1 517 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF814B7Z6K7 855 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 EML2O95834 649 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 HOXB5P09067 269 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 OR8U9P0C7N5 309 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 HTR2AP28223 471 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 NXPH1P58417 271 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 AQP6Q13520 282 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 Q6ZNX1 250 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 PRSS45Q7RTY3 260 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 SYS1Q8N2H4 156 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 DNAAF1Q8NEP3 725 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 OR13C5Q8NGS8 318 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 OR4K15Q8NH41 348 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 OR1L3Q8NH93 324 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 PSMF1Q92530 271 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 VN1R1Q9GZP7 353 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 METTL17Q9H7H0 456 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-208ENST00000478423 SLC22A11Q9NSA0 550 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 SIRT3Q9NTG7 399 aaPredicted RBP12.94□□□□□ -0.34
NPHP4-208ENST00000478423 ZFP57Q9NU63 452 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 STEAP1Q9UHE8 339 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 SIPA1L1O43166 1804 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 SHISA7A6NL88 538 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 DPM1O60762 260 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 TCRBP04435 133 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 PTPN6P29350 595 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 CX3CR1P49238 355 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 CLDN6P56747 220 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 ANGPTL5Q86XS5 388 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 CCDC28AQ8IWP9 274 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 FAM71CQ8NEG0 241 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 TTC9Q92623 222 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 ETV7Q9Y603 341 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 LOC107986453A0A1B0GWG9 222 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 PRSS37A4D1T9 235 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 SLC34A2O95436 690 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 TSNAXQ99598 290 aaKnown RBP12.94□□□□□ -0.34
NPHP4-208ENST00000478423 PPA2Q9H2U2 334 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 OR14J1Q9UGF5 321 aa12.94□□□□□ -0.34
NPHP4-208ENST00000478423 A0A087WUJ7 227 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 A0A1B0GV50 99 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 TDRD15B5MCY1 1934 aaKnown RBP12.93□□□□□ -0.34
NPHP4-208ENST00000478423 TK1P04183 234 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ITGB2P05107 769 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 CASP3P42574 277 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 RGS19P49795 217 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 PCBP3P57721 371 aaKnown RBP12.93□□□□□ -0.34
NPHP4-208ENST00000478423 RPL19P84098 196 aaKnown RBP12.93□□□□□ -0.34
NPHP4-208ENST00000478423 AGAP7PQ5VUJ5 663 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 RTL6Q6ICC9 239 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms