RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 BCAS2O75934 225 aaPredicted RBP0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 CYB5R3P00387 301 aaPredicted RBP0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 TGFAP01135 160 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 IGHG4P01861 327 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 ETS1P14921 441 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 IMPDH1P20839 514 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 LOXP28300 417 aaPredicted RBP0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 KRTAP10-4P60372 401 aaPredicted RBP0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 FMODQ06828 376 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 ORMDL2Q53FV1 153 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 FAM133BQ5BKY9 247 aaKnown RBP0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 METTL21CQ5VZV1 264 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 CATSPER4Q7RTX7 472 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 HDDC2Q7Z4H3 204 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 SNX20Q7Z614 316 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 TMEM25Q86YD3 366 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 ZNF101Q8IZC7 436 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 CEP112Q8N8E3 955 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 CMTM2Q8TAZ6 248 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 FAM3CQ92520 227 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 ACAT2Q9BWD1 397 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 RAB34Q9BZG1 259 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 MCTS1Q9ULC4 181 aaKnown RBP0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 OR10H1Q9Y4A9 318 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 KDRP35968 1356 aa0.29□□□□□ -2.36
NCKAP1-204ENST00000477988 DOCK6Q96HP0 2047 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 TRAV6A0A075B6T7 132 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 IGKV1D-43A0A0B4J1Z2 117 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 GPR89AB7ZAQ6 455 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 RAB3DO95716 219 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 GPR89BP0CG08 455 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 CALM1P0DP23 149 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 CALM2P0DP24 149 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 CALM3P0DP25 149 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 PDK1Q15118 436 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 C2orf76Q3KRA6 126 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 MPV17L2Q567V2 206 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 RNASE13Q5GAN3 156 aaKnown RBP0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 CDKL3Q8IVW4 592 aaPredicted RBP0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 SPC24Q8NBT2 197 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 LY6G5BQ8NDX9 201 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 OR1F12Q8NHA8 337 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 MUC7Q8TAX7 377 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 MAIP1Q8WWC4 291 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 SLC13A3Q8WWT9 602 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 MS4A4EQ96PG1 132 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 C8orf17Q9NRJ1 99 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 TMEM106BQ9NUM4 274 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 ASF1BQ9NVP2 202 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 MEMO1Q9Y316 297 aa0.28□□□□□ -2.36
NCKAP1-204ENST00000477988 MED13Q9UHV7 2174 aa0.28□□□□□ -2.37
NCKAP1-204ENST00000477988 A0A1W2PNV4 684 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 OR5B21A6NL26 309 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 F5H6K3 240 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 H7C417 338 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 CHST10O43529 356 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 DIRAS1O95057 198 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 ASGR1P07306 291 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 CSRP1P21291 193 aaKnown RBP0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 NT5EP21589 574 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 QARSP47897 775 aaKnown RBP0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 IDH2P48735 452 aaKnown RBP0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 ARFIP1P53367 373 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 YBEYP58557 167 aaPredicted RBP0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 NUTF2P61970 127 aaKnown RBP0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 CRADDP78560 199 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 NCBP1Q09161 790 aaKnown RBP0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 RAET1GQ6H3X3 334 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 RAB12Q6IQ22 244 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 TRIM40Q6P9F5 258 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 LRRC8BQ6P9F7 803 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 BLOC1S2Q6QNY1 142 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 TBPL2Q6SJ96 375 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 FBXW12Q6X9E4 464 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 ASCL5Q7RTU5 278 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 ANKRD23Q86SG2 305 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 ELMOD2Q8IZ81 293 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 PYROXD1Q8WU10 500 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 ZBED3Q96IU2 234 aaPredicted RBP0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 SAMD8Q96LT4 415 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 IGF2BP2-AS1Q96M15 143 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 ZSCAN16Q9H4T2 348 aaPredicted RBP0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 TAS2R1Q9NYW7 299 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 ZNF492Q9P255 531 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 CHMP2BQ9UQN3 213 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 HYOU1Q9Y4L1 999 aa0.27□□□□□ -2.37
NCKAP1-204ENST00000477988 FAM47DPA6NHR8 397 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 K7EMT4 169 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 AQP9O43315 295 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 MGRN1O60291 552 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 PTBP3O95758 552 aaKnown RBP0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 INAFM2P0DMQ5 153 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 DRD5P21918 477 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 SERPINB5P36952 375 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 OGDHQ02218 1023 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 KLRC3Q07444 240 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 TPBGQ13641 420 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 SLC9A3R2Q15599 337 aa0.26□□□□□ -2.37
NCKAP1-204ENST00000477988 C10orf120Q5SQS8 335 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms