RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 RELBQ01201 579 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 THEM4Q5T1C6 240 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 KIRREL3Q8IZU9 778 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 KLF14Q8TD94 323 aaPredicted RBP17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 MAL2Q969L2 176 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 DCLRE1CQ96SD1 692 aaKnown RBP17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 C1RLQ9NZP8 487 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 IL20RAQ9UHF4 553 aa17.02■□□□□ 0.32
PDLIM1-202ENST00000477757 CLPSL1A2RUU4 121 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 SRRM5B3KS81 715 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 H3BSA7 217 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 TYROBPO43914 113 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 IL6P05231 212 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 BMP2P12643 396 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 ETS2P15036 469 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 BTG1P62324 171 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 PAX2Q02962 417 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 HSF2Q03933 536 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 ZMYND11Q15326 602 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 SWT1Q5T5J6 900 aaKnown RBP17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 ASPHD2Q6ICH7 369 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 DHRS4L2Q6PKH6 230 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 LRRC28Q86X40 367 aaPredicted RBP17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 ZNF283Q8N7M2 679 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 SLC25A40Q8TBP6 338 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 LRCH1Q9Y2L9 728 aa17.01■□□□□ 0.31
PDLIM1-202ENST00000477757 CRYBA1P05813 215 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 QDPRP09417 244 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 CCNOP22674 350 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 STOMP27105 288 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 KRTAP10-3P60369 221 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 TNFAIP6P98066 277 aaPredicted RBP17■□□□□ 0.31
PDLIM1-202ENST00000477757 MELKQ14680 651 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 PABPC1L2AQ5JQF8 200 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 FAM205BPQ63HN1 556 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 UNQ6126/PRO20091Q6UXV3 157 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 RFPL4BQ6ZWI9 263 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 POM121L2Q96KW2 1035 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 OR2J1Q9GZK6 312 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 KLHL21Q9UJP4 597 aa17■□□□□ 0.31
PDLIM1-202ENST00000477757 SLC22A31A6NKX4 558 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 SDHDO14521 159 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 OR6A2O95222 327 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 TGDSO95455 350 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 RGNQ15493 299 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 OR1Q1Q15612 314 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 HIST3H3Q16695 136 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 DEFB112Q30KQ8 113 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 FIP1L1Q6UN15 594 aaKnown RBP16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 BTNL3Q6UXE8 466 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 LRRN1Q6UXK5 716 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 MSANTD1Q6ZTZ1 278 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 C1orf174Q8IYL3 243 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 DACT3Q96B18 629 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 SIGLEC11Q96RL6 698 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 ARHGDIGQ99819 225 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 SLC19A3Q9BZV2 496 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 TMEM27Q9HBJ8 222 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 MSL2Q9HCI7 577 aa16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 EIF3KQ9UBQ5 218 aaKnown RBP16.99■□□□□ 0.31
PDLIM1-202ENST00000477757 WDR91A4D1P6 747 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 C5orf58C9J3I9 102 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 MGRN1O60291 552 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 TPST1O60507 370 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 ICMTO60725 284 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 TSPAN15O95858 294 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 IGHG1P01857 330 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 SELEP16581 610 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 RBMXP38159 391 aaKnown RBP16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 SLC1A6P48664 564 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 ZNF84P51523 738 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 CDH12P55289 794 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 RGS8P57771 180 aaPredicted RBP16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 FADDQ13158 208 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 PDCD1Q15116 288 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 LRRC18Q8N456 261 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 MCHR2Q969V1 340 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 ZDHHC16Q969W1 377 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 ITCHQ96J02 903 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 RMND5AQ9H871 391 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 MARCH7Q9H992 704 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 TAS2R5Q9NYW4 299 aa16.98■□□□□ 0.31
PDLIM1-202ENST00000477757 LOC100509620A0A075B734 347 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 IGHV2-70DA0A0C4DH43 119 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 C5orf49A4QMS7 147 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 CEACAM18A8MTB9 384 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 BIRC5O15392 142 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 MDH2P40926 338 aaKnown RBP16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 CDK5R2Q13319 367 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 TAF9Q16594 264 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 MTX3Q5HYI7 312 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 CEP85LQ5SZL2 805 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 ZNF774Q6NX45 483 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 MUC20Q8N307 709 aaPredicted RBP16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 TMEM86BQ8N661 226 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 HIPK4Q8NE63 616 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 NOXO1Q8NFA2 376 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 SEPHS2Q99611 448 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 SPATA5L1Q9BVQ7 753 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 SSBP3Q9BWW4 388 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms