RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ETAA1Q9NY74 926 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 B3GNT2Q9NY97 397 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF224Q9NZL3 707 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 PSMC3IPQ9P2W1 217 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 B3GAT1Q9P2W7 334 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 DCDC2Q9UHG0 476 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZDHHC2Q9UIJ5 367 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 TMED5Q9Y3A6 229 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 WDR45Q9Y484 360 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 AGAP5A6NIR3 686 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 OR6C65A6NJZ3 312 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 B4DSR2 109 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 H0YIZ8 118 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 H3BQF6 201 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 FAAHO00519 579 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CFLARO15519 480 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 EIF1BO60739 113 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 LYPLA1O75608 230 aaPredicted RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CRYAAP02489 173 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 MSMBP08118 114 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 KRT16P08779 473 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CBR1P16152 277 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CREB1P16220 341 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 PRPS1L1P21108 318 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CDKN2CP42773 168 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 SLC1A3P43003 542 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 ALDH3B1P43353 468 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 POLR2HP52434 150 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TPTEP56180 551 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CLDN8P56748 225 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 LOXL3P58215 753 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 NAA20P61599 178 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 DEFA6Q01524 100 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 IL1RL1Q01638 556 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 ROR2Q01974 943 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TGFBR3Q03167 851 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 EPS8Q12929 822 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 SNTB2Q13425 540 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CASP8Q14790 479 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TWIST1Q15672 202 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CCDC153Q494R4 210 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM255AQ5JRV8 349 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 MRPL2Q5T653 305 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 C1QTNF12Q5T7M4 302 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 KRT80Q6KB66 452 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 KLHL24Q6TFL4 600 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 USP43Q70EL4 1123 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TRMT10CQ7L0Y3 403 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 C16orf62Q7Z3J2 963 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 GPAT4Q86UL3 456 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 VRK2Q86Y07 508 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 CLIP4Q8N3C7 705 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 ARFGAP2Q8N6H7 521 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 POMGNT2Q8NAT1 580 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 OR4F15Q8NGB8 312 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 KIF18AQ8NI77 898 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 FGFBP3Q8TAT2 258 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 GTF3AQ92664 365 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF566Q969W8 418 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 MOAP1Q96BY2 351 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 ZMYND19Q96E35 227 aaPredicted RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 NEURL3Q96EH8 262 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TEX37Q96LM6 180 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TSPAN32Q96QS1 320 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 SLC6A7Q99884 636 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 SF3B5Q9BWJ5 86 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TINAGL1Q9GZM7 467 aaPredicted RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 IQCGQ9H095 443 aaKnown RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF696Q9H7X3 374 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 OBP2BQ9NPH6 170 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF275Q9NSD4 429 aaPredicted RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 SLC6A13Q9NSD5 602 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM45AQ9NWC5 275 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 ADPRHL2Q9NX46 363 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 SLC17A7Q9P2U7 560 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 OPN4Q9UHM6 478 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 FZR1Q9UM11 496 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 PCDHGB4Q9UN71 923 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 SLC35A3Q9Y2D2 325 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 SPIN1Q9Y657 262 aaPredicted RBP3.89□□□□□ -1.79
CKS1B-207ENST00000477676 DNAH7Q8WXX0 4024 aa3.89□□□□□ -1.79
CKS1B-207ENST00000477676 TENM3Q9P273 2699 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 CFAP73A6NFT4 308 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 DUXAA6NLW8 204 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM114B3SHH9 223 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF587BE7ETH6 402 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 RPL36A-HNRNPH2H7BZ11 118 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 COPEO14579 308 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 PLPP2O43688 288 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 TRAF3IP2O43734 574 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ITM2AO43736 263 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 SYNGR3O43761 229 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 INMTO95050 263 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 CPSF4O95639 269 aaKnown RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 CLPTM1O96005 669 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 AK1P00568 194 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 HPRP00739 348 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 HLA-HP01893 362 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 GPIP06744 558 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms