RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 MMP25Q9NPA2 562 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 CHRNA9Q9UGM1 479 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 ACAD8Q9UKU7 415 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 DOCK9Q9BZ29 2069 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 FAM230AA0A1W2PPH8 454 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 BHLHE40O14503 412 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 IGHV3-9P01782 118 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 NR2C1P13056 603 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 RAB3AP20336 220 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 CBX5P45973 191 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 FMODQ06828 376 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ETFDHQ16134 617 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF74Q16587 644 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 STAC2Q6ZMT1 411 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 SYT13Q7L8C5 426 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 BATF2Q8N1L9 274 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 OR51T1Q8NGJ9 327 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 HOXB13Q92826 284 aaPredicted RBP10.01□□□□□ -0.81
COL27A1-204ENST00000477421 GON7Q9BXV9 100 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 LDAHQ9H6V9 325 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ACKR4Q9NPB9 350 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 CYSLTR2Q9NS75 346 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 TAS2R4Q9NYW5 299 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 KCNE5Q9UJ90 142 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 TMEM235A6NFC5 223 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF850A8MQ14 1090 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 F5H5P2 479 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 OR2J2O76002 312 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 IGHG1P01857 330 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 HLA-AP01891 365 aaKnown RBP10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ZGLP1P0C6A0 271 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 NME1P15531 152 aaKnown RBP10.01□□□□□ -0.81
COL27A1-204ENST00000477421 SERPINA2P20848 420 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 TBXA2RP21731 343 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 CSNK1A1P48729 337 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 CSNK2A1P68400 391 aaPredicted RBP10.01□□□□□ -0.81
COL27A1-204ENST00000477421 IL13RA1P78552 427 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 NR0B2Q15466 257 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 SLC36A2Q495M3 483 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 FAM198BQ6UWH4 519 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 COMMD7Q86VX2 200 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 GPR137CQ8N3F9 429 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 CSNK2A3Q8NEV1 391 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 OR1L3Q8NH93 324 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 UPRTQ96BW1 309 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 MED18Q9BUE0 208 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 TREM1Q9NP99 234 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 PISDQ9UG56 409 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 COPS3Q9UNS2 423 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 NSG1A0A0A6YYJ2 146 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 A0A1B0GV50 99 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 TNFRSF10AO00220 468 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 NUDT21O43809 227 aaKnown RBP10.01□□□□□ -0.81
COL27A1-204ENST00000477421 IGHV4-34P06331 123 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ERCC1P07992 297 aaPredicted RBP10.01□□□□□ -0.81
COL27A1-204ENST00000477421 GABRR1P24046 479 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ABCD3P28288 659 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 P2RX1P51575 399 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 CCR9P51686 369 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 DLX5P56178 289 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 FXYD4P59646 89 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF117Q03924 483 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 TMEM91Q6ZNR0 172 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 PNPLA2Q96AD5 504 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 VN1R1Q9GZP7 353 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 C1orf198Q9H425 327 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 ASH2LQ9UBL3 628 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 PTPRDP23468 1912 aa10.01□□□□□ -0.81
COL27A1-204ENST00000477421 BLACEA4D250 179 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 C4orf47A7E2U8 309 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 H0YIG0 161 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 PLA2G10O15496 165 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 FARS2O95363 451 aaKnown RBP10□□□□□ -0.81
COL27A1-204ENST00000477421 CSF1P09603 554 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 CASRP41180 1078 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 GUCA2AQ02747 115 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 SLC35D3Q5M8T2 416 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 SYS1Q8N2H4 156 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 ASB12Q8WXK4 309 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 VSTM2LQ96N03 204 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 SIGLEC11Q96RL6 698 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 BANF2Q9H503 90 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 C12orf4Q9NQ89 552 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 ABI3Q9P2A4 366 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 MYLKQ15746 1914 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 IGHV1OR15-9A0A0B4J2B8 117 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 NAP1L6A6NFF2 107 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 C17orf51A8MQB3 221 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 TMEM229AB2RXF0 380 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 SLC33A1O00400 549 aaPredicted RBP10□□□□□ -0.81
COL27A1-204ENST00000477421 OIP5O43482 229 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 MPZL1O95297 269 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 IGKV1D-16P01601 117 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 RLN2P04090 185 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 RBMXP38159 391 aaKnown RBP10□□□□□ -0.81
COL27A1-204ENST00000477421 TAS2R20P59543 309 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 TRIM61Q5EBN2 209 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 H1FNTQ75WM6 255 aaPredicted RBP10□□□□□ -0.81
COL27A1-204ENST00000477421 ZPLD1Q8TCW7 415 aa10□□□□□ -0.81
COL27A1-204ENST00000477421 EDAQ92838 391 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms