RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ITCHQ96J02 903 aa13.83□□□□□ -0.2
APOBEC3F-203ENST00000476513 RBM4BQ9BQ04 359 aaKnown RBP13.83□□□□□ -0.2
APOBEC3F-203ENST00000476513 TMEM106BQ9NUM4 274 aa13.83□□□□□ -0.2
APOBEC3F-203ENST00000476513 TAS2R5Q9NYW4 299 aa13.83□□□□□ -0.2
APOBEC3F-203ENST00000476513 OR5V1Q9UGF6 321 aa13.83□□□□□ -0.2
APOBEC3F-203ENST00000476513 KLHL21Q9UJP4 597 aa13.83□□□□□ -0.2
APOBEC3F-203ENST00000476513 TRIM33Q9UPN9 1127 aa13.83□□□□□ -0.2
APOBEC3F-203ENST00000476513 C5orf58C9J3I9 102 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 F5H0A9 414 aaPredicted RBP13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 TIMM23O14925 209 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 TPST2O60704 377 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 OR6A2O95222 327 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 BMP2P12643 396 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 STOMP27105 288 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 LIPAP38571 399 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 CDH12P55289 794 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 KRTAP10-3P60369 221 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 NCALDP61601 193 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 TNFAIP6P98066 277 aaPredicted RBP13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 RELBQ01201 579 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 FBLN7Q53RD9 439 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 KIRREL3Q8IZU9 778 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 UPRTQ96BW1 309 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 POM121L2Q96KW2 1035 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 WFDC6Q9BQY6 131 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 OR2J1Q9GZK6 312 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 RMND5AQ9H871 391 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 MSL2Q9HCI7 577 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZDHHC8Q9ULC8 765 aa13.82□□□□□ -0.2
APOBEC3F-203ENST00000476513 LOC100509620A0A075B734 347 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 BIRC5O15392 142 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 SLC22A3O75751 556 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 CRYBA1P05813 215 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 PPIAL4GP0DN37 164 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 EPHA3P29320 983 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 RGS8P57771 180 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 PAX2Q02962 417 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZMYND11Q15326 602 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 HIST3H3Q16695 136 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 DEFB112Q30KQ8 113 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 ESCO2Q56NI9 601 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 C6orf10Q5SRN2 563 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 ASPHD2Q6ICH7 369 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZNF283Q8N7M2 679 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 UBE2FQ969M7 185 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 MCHR2Q969V1 340 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 ARHGDIGQ99819 225 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 PRDM13Q9H4Q3 707 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 WDR55Q9H6Y2 383 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 TNFRSF19Q9NS68 423 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 C1RLQ9NZP8 487 aa13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 EIF3KQ9UBQ5 218 aaKnown RBP13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 CGGBP1Q9UFW8 167 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3F-203ENST00000476513 TANC2Q9HCD6 1990 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 TRAV40A0A0B4J280 105 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 CLPSL1A2RUU4 121 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 C5orf49A4QMS7 147 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 CLIC1O00299 241 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 RNF13O43567 381 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 ALX3O95076 343 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 NDUFA7O95182 113 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 NGFP01138 241 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZNF84P51523 738 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 BTG1P62324 171 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 IFFO1Q0D2I5 559 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 FADDQ13158 208 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 SWT1Q5T5J6 900 aaKnown RBP13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 FIP1L1Q6UN15 594 aaKnown RBP13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 MSANTD1Q6ZTZ1 278 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 RFPL4BQ6ZWI9 263 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 HIPK4Q8NE63 616 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 NFKBIDQ8NI38 313 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZNF347Q96SE7 839 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 IL20RAQ9UHF4 553 aa13.8□□□□□ -0.2
APOBEC3F-203ENST00000476513 SRRM5B3KS81 715 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 MGRN1O60291 552 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 TGDSO95455 350 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 CH25HO95992 272 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 IGHG1P01857 330 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 IDO1P14902 403 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 SELEP16581 610 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 BGNP21810 368 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 CLRN1P58418 232 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 PPP1CBP62140 327 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 CDK5R2Q13319 367 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZNF74Q16587 644 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 ZMAT1Q5H9K5 638 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 MTX3Q5HYI7 312 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 BTNL3Q6UXE8 466 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 LRRN1Q6UXK5 716 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 UNQ6126/PRO20091Q6UXV3 157 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 LINC00114Q6XXX2 140 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 BRD3OSQ6XYD6 125 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 KRT73Q86Y46 540 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 ABHD4Q8TB40 342 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 SAMD8Q96LT4 415 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 SIGLEC11Q96RL6 698 aa13.79□□□□□ -0.2
APOBEC3F-203ENST00000476513 SPATA5L1Q9BVQ7 753 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms