RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 LEFTY2O00292 366 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 DVL1O14640 695 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 CYTIPO60759 359 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 PDGFBP01127 241 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 HPXP02790 462 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF728P0DKX0 622 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 F2RP25116 425 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 ITGB8P26012 769 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 FGF9P31371 208 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 DVL1P1P54792 670 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 LGALS4P56470 323 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 MFGE8Q08431 387 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 SQSTM1Q13501 440 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 INSL4Q14641 139 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 LRRC56Q8IYG6 542 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 FAM160A2Q8N612 972 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 STT3BQ8TCJ2 826 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 GSN-AS1Q9NRJ2 163 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 GOLT1BQ9Y3E0 138 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 DSPPQ9NZW4 1301 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 A0A0B4J2A0 478 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 HEPACAM2A8MVW5 462 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 SLC16A7O60669 478 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 DFFBO76075 338 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 NSA2O95478 260 aaKnown RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 ADH4P08319 380 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 SERPINA2P20848 420 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 NME2P22392 152 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 TAGLN2P37802 199 aaKnown RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 WNT3P56703 355 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 BAXQ07812 192 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 PCK2Q16822 640 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 APOOLQ6UXV4 268 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 GLB1L2Q8IW92 636 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 EIF4E3Q8N5X7 224 aaKnown RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 HSD17B11Q8NBQ5 300 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 OR52I1Q8NGK6 324 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 OR5B3Q8NH48 314 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 NKX3-1Q99801 234 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 ULBP2Q9BZM5 246 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 OPA3Q9H6K4 179 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 TM7SF3Q9NS93 570 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 NDRG3Q9UGV2 375 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 SHPKQ9UHJ6 478 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 TRIOBPQ9H2D6 2365 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 ZSWIM8A7E2V4 1837 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 GLB1P16278 677 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 RING1Q06587 406 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 GAB1Q13480 694 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 PSAPL1Q6NUJ1 521 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 LYPD4Q6UWN0 246 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 SEZ6L2Q6UXD5 910 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 TECPR1Q7Z6L1 1165 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 OR4A16Q8NH70 328 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF582Q96NG8 517 aaPredicted RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ZFYVE21Q9BQ24 234 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 GPR174Q9BXC1 333 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 VDAC3Q9Y277 283 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 DTX4Q9Y2E6 619 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 OR6C68A6NDL8 312 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 KLF8O95600 359 aaPredicted RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 BTF3P20290 206 aaKnown RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 IMPA1P29218 277 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 CCR6P51684 374 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 LTBQ06643 244 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF528Q3MIS6 628 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 SLC36A2Q495M3 483 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 CD200R1LQ6Q8B3 271 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 RNF165Q6ZSG1 346 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ESPNLQ6ZVH7 1005 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 LFNGQ8NES3 379 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF251Q9BRH9 671 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 SLC35A3Q9Y2D2 325 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 PCDHGA1Q9Y5H4 931 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 DENND4AQ7Z401 1863 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 M0R3H8 397 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 FOXE1O00358 373 aaPredicted RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 LAMTOR5O43504 91 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ENSAO43768 121 aaKnown RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 SDC3O75056 442 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 TOX4O94842 621 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 SIX6O95475 246 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 IGFBP6P24592 240 aaPredicted RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 GKP32189 559 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 PSMB10P40306 273 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 XCR1P46094 333 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 RAB7AP51149 207 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 RBPJQ06330 500 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 FAM26DQ5JW98 314 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF574Q6ZN55 896 aaPredicted RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 UMODL1-AS1Q8N2C9 162 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 NKX6-2Q9C056 277 aaPredicted RBP10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF586Q9NXT0 402 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ADAMTS5Q9UNA0 930 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 ENTPD2Q9Y5L3 495 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 PEX10O60683 326 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 GPR32O75388 356 aa10.61□□□□□ -0.71
U2AF1-209ENST00000475639 MT-ND4P03905 459 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms