RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 FAM27BQ5VT28 67 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 RGS7BPQ6MZT1 257 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 SLC25A47Q6Q0C1 308 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 RINLQ6ZS11 566 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 SLC16A14Q7RTX9 510 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 HDXQ7Z353 690 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 NANOGNBQ7Z5D8 188 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 TSEN54Q7Z6J9 526 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 RBM15BQ8NDT2 890 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 AKR7LQ8NHP1 331 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF519Q8TB69 540 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 SYNPRQ8TBG9 265 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 TMEM239Q8WW34 195 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 NSMAFQ92636 917 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 TMEM186Q96B77 213 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 SGTBQ96EQ0 304 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 MARS2Q96GW9 593 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 ECSITQ9BQ95 431 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 SIKE1Q9BRV8 207 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 RNF121Q9H920 327 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 INIPQ9NRY2 104 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 MAN2C1Q9NTJ4 1040 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 CMTM6Q9NX76 183 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 KLHL21Q9UJP4 597 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 FBXL3Q9UKT7 428 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 BAG5Q9UL15 447 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF346Q9UL40 294 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 HEATR1Q9H583 2144 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 A0A1W2PRG6 482 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 CENPBD1B2RD01 187 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 J3KTA2 159 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 MRASO14807 208 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 TCF21O43680 179 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 FARS2O95363 451 aaKnown RBP5.97□□□□□ -1.45
HDAC3-207ENST00000475549 NPPAP01160 153 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 IGHV1-46P01743 117 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 IGHV3-13P01766 116 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 MSMBP08118 114 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 SAGP10523 405 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-207ENST00000475549 THRBP10828 461 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF32P17041 273 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 HNF1AP20823 631 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 CCNOP22674 350 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 STOMP27105 288 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 LAP3P28838 519 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 SRP14P37108 136 aaKnown RBP5.97□□□□□ -1.45
HDAC3-207ENST00000475549 RAD52P43351 418 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 YAP1P46937 504 aaKnown RBP5.97□□□□□ -1.45
HDAC3-207ENST00000475549 MMP15P51511 669 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 KLF3P57682 345 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-207ENST00000475549 TAS2R41P59536 307 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 ERVK-25P63136 954 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 SELENOWP63302 87 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 MVKQ03426 396 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 GLO1Q04760 184 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 NKPD1Q17RQ9 610 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 SPATA46Q5T0L3 261 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 THEM4Q5T1C6 240 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 LIPNQ5VXI9 398 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 REP15Q6BDI9 236 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 FAHD2BQ6P2I3 314 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-207ENST00000475549 TBPL2Q6SJ96 375 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 VTCN1Q7Z7D3 282 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 DPPA2Q7Z7J5 298 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 IGFN1Q86VF2 1251 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 NRMQ8IXM6 262 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 SLC15A3Q8IY34 581 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 RFLNBQ8N5W9 214 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-207ENST00000475549 NOXO1Q8NFA2 376 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 SEMA6DQ8NFY4 1073 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 RASSF5Q8WWW0 418 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 C11orf40Q8WZ69 217 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 BPIFA2Q96DR5 249 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 FAHD2AQ96GK7 314 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 SH3GL1Q99961 368 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 OR2H1Q9GZK4 316 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 WNT5BQ9H1J7 359 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 TXNIPQ9H3M7 391 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 METTL17Q9H7H0 456 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-207ENST00000475549 SMURF2Q9HAU4 748 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 CDH20Q9HBT6 801 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 G6PC2Q9NQR9 355 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 FGFR1OP2Q9NVK5 253 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 NKIRAS2Q9NYR9 191 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 RHCGQ9UBD6 479 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 HIF3AQ9Y2N7 669 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 MED31Q9Y3C7 131 aa5.97□□□□□ -1.45
HDAC3-207ENST00000475549 LOC105371242A0A075B767 164 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 IGHV1-69-2A0A0G2JMI3 117 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 IQCMA0A1B0GVH7 501 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 SLC22A23A1A5C7 686 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 C5orf49A4QMS7 147 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 ZSCAN5BA6NJL1 495 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 NPIPB13A6NJU9 1138 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 FAM220BPB1ANY3 271 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 NPIPB4C9JG80 1138 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 MCIDASD6RGH6 385 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 CDC42EP2O14613 210 aa5.96□□□□□ -1.46
HDAC3-207ENST00000475549 PLPP2O43688 288 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms