RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 STX19Q8N4C7 294 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 MOSPD2Q8NHP6 518 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 ZNF417Q8TAU3 575 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 IGFBPL1Q8WX77 278 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 PIK3IP1Q96FE7 263 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 ZC3HAV1LQ96H79 300 aaKnown RBP13.77□□□□□ -0.21
CPSF3-203ENST00000475482 ARL5BQ96KC2 179 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 ZNF587Q96SQ5 575 aaPredicted RBP13.77□□□□□ -0.21
CPSF3-203ENST00000475482 TMEM204Q9BSN7 226 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 NAA11Q9BSU3 229 aaPredicted RBP13.77□□□□□ -0.21
CPSF3-203ENST00000475482 COPS4Q9BT78 406 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 ACTR6Q9GZN1 396 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 DLL4Q9NR61 685 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 DNAJC27Q9NZQ0 273 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 PSORS1C1Q9UIG5 152 aa13.77□□□□□ -0.21
CPSF3-203ENST00000475482 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.76□□□□□ -0.21
CPSF3-203ENST00000475482 NPIPB13A6NJU9 1138 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 NPIPB4C9JG80 1138 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 M0R129 80 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 CNOT4O95628 575 aaKnown RBP13.76□□□□□ -0.21
CPSF3-203ENST00000475482 TXNDC12O95881 172 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 IMPDH2P12268 514 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 AHCYP23526 432 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 EDNRAP25101 427 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 RPL5P46777 297 aaKnown RBP13.76□□□□□ -0.21
CPSF3-203ENST00000475482 LGALS3BPQ08380 585 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 RASGEF1BQ0VAM2 473 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 P2RY6Q15077 328 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 ACKR1Q16570 336 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 SMN1Q16637 294 aaKnown RBP13.76□□□□□ -0.21
CPSF3-203ENST00000475482 SLC35F1Q5T1Q4 408 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 PRSS48Q7RTY5 328 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 HDDC2Q7Z4H3 204 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 LRRC75AQ8NAA5 344 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 STEAP2Q8NFT2 490 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 ZNF582Q96NG8 517 aaPredicted RBP13.76□□□□□ -0.21
CPSF3-203ENST00000475482 CCDC90BQ9GZT6 254 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 TAS2R5Q9NYW4 299 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 USF3Q68DE3 2245 aa13.76□□□□□ -0.21
CPSF3-203ENST00000475482 A6NIZ1 184 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 SLC22A31A6NKX4 558 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 TRIM64CA6NLI5 447 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 ZNF716A6NP11 495 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 XKRYO14609 159 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 SMIM18P0DKX4 95 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 CD99P14209 185 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 DAP3P51398 398 aaKnown RBP13.75□□□□□ -0.21
CPSF3-203ENST00000475482 NUDT6P53370 316 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 SLC16A1P53985 500 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 CDH11P55287 796 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 RAP1BP61224 184 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 RAP1AP62834 184 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 ERVK-25P63136 954 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 MVKQ03426 396 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.75□□□□□ -0.21
CPSF3-203ENST00000475482 ITGADQ13349 1161 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 SEZ6L2Q6UXD5 910 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 Q6ZT83 130 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 AHSA2Q719I0 299 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 PXKQ7Z7A4 578 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 ADCK1Q86TW2 530 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 IGFN1Q86VF2 1251 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 CPOQ8IVL8 374 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 OR52E2Q8NGJ4 325 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 OTULINQ96BN8 352 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 S100PBPQ96BU1 408 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 SNX18Q96RF0 628 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 USB1Q9BQ65 265 aaKnown RBP13.75□□□□□ -0.21
CPSF3-203ENST00000475482 TXNIPQ9H3M7 391 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 FKBP14Q9NWM8 211 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 AASSQ9UDR5 926 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 WARS2Q9UGM6 360 aaKnown RBP13.75□□□□□ -0.21
CPSF3-203ENST00000475482 PLCE1Q9P212 2302 aa13.75□□□□□ -0.21
CPSF3-203ENST00000475482 C11orf98E9PRG8 122 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 VAMP5O95183 116 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 RENP00797 406 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 IGHMP01871 453 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 F13BP05160 661 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 CDK1P06493 297 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 DBTP11182 482 aaKnown RBP13.74□□□□□ -0.21
CPSF3-203ENST00000475482 HIST1H1CP16403 213 aaKnown RBP13.74□□□□□ -0.21
CPSF3-203ENST00000475482 COX5AP20674 150 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 HTR1FP30939 366 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 NTF4P34130 210 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 MTNR1AP48039 350 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 CDH15P55291 814 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 RIPPLY3P57055 190 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 RPL27P61353 136 aaKnown RBP13.74□□□□□ -0.21
CPSF3-203ENST00000475482 ZNF91Q05481 1191 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 RAB40BQ12829 278 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 LCN1P1Q5VSP4 162 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 AADACL4Q5VUY2 407 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 TMEM225Q6GV28 225 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 PLBD1Q6P4A8 553 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 PAQR6Q6TCH4 344 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 C20orf204Q6ZNR8 217 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 FAM122BQ7Z309 247 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 LRRC75A-AS1Q8N1F1 130 aa13.74□□□□□ -0.21
CPSF3-203ENST00000475482 OR4K13Q8NH42 304 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms