RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 C17orf107Q6ZR85 190 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 HIST3H2AQ7L7L0 130 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 ZER1Q7Z7L7 766 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 NFKBIDQ8NI38 313 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 IPCEF1Q8WWN9 437 aaPredicted RBP10.65□□□□□ -0.7
SKA3-206ENST00000475251 GTF3AQ92664 365 aaKnown RBP10.65□□□□□ -0.7
SKA3-206ENST00000475251 HIST1H2ACQ93077 130 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 C1orf147Q96MC9 270 aaPredicted RBP10.65□□□□□ -0.7
SKA3-206ENST00000475251 CCNB1IP1Q9NPC3 277 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 SLCO1B3Q9NPD5 702 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 MMP26Q9NRE1 261 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 STX18Q9P2W9 335 aaKnown RBP10.65□□□□□ -0.7
SKA3-206ENST00000475251 OR5V1Q9UGF6 321 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 TRIM33Q9UPN9 1127 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 INSIG2Q9Y5U4 225 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 A8MXK9 166 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 CHP2O43745 196 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 ZNF500O60304 480 aaPredicted RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 TPST1O60507 370 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 KNG1P01042 644 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 IGHV2-70P01814 119 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 CD55P08174 381 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 SBK2P0C263 348 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 NR2C1P13056 603 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 TNFRSF1AP19438 455 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 TNFSF4P23510 183 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 CPT2P23786 658 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 SLC6A2P23975 617 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 SLC6A9P48067 706 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 GDI2P50395 445 aaKnown RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 MELKQ14680 651 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 ZNF74Q16587 644 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 KRT71Q3SY84 523 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 ESCO2Q56NI9 601 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 PABPC1L2AQ5JQF8 200 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 KLF17Q5JT82 389 aaPredicted RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 THEM4Q5T1C6 240 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 TTC33Q6PID6 262 aaPredicted RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 C9orf139Q6ZV77 190 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 COMTD1Q86VU5 262 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 ARMC8Q8IUR7 673 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 LRRC18Q8N456 261 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 OR52E2Q8NGJ4 325 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 GTF2H4Q92759 462 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 MCHR2Q969V1 340 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 TMIGD2Q96BF3 282 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 MARS2Q96GW9 593 aaKnown RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 ZNF48Q96MX3 618 aaPredicted RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 PAIP2Q9BPZ3 127 aaKnown RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 PAIP1Q9H074 479 aaKnown RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 PATZ1Q9HBE1 687 aaKnown RBP10.64□□□□□ -0.71
SKA3-206ENST00000475251 THAP1Q9NVV9 213 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 TAS2R5Q9NYW4 299 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 IL20RAQ9UHF4 553 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 ZNF229Q9UJW7 825 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 CORO2BQ9UQ03 480 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
SKA3-206ENST00000475251 A0A1W2PRG6 482 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 GMNCA6NCL1 334 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 ZSCAN5BA6NJL1 495 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 MCIDASD6RGH6 385 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 M0QZ24 198 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 UBDO15205 165 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 CH25HO95992 272 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 MMP7P09237 267 aaPredicted RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 UMPSP11172 480 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 MDKP21741 143 aaPredicted RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 ARHGDIAP52565 204 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 TNFAIP6P98066 277 aaPredicted RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 SCARB2Q14108 478 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 SPATA46Q5T0L3 261 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 C16orf87Q6PH81 154 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 BTNL3Q6UXE8 466 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 LINC00114Q6XXX2 140 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 SPATC1Q76KD6 591 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 ALDH16A1Q8IZ83 802 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 BCL6BQ8N143 479 aaPredicted RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 MUC20Q8N307 709 aaPredicted RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 PARP8Q8N3A8 854 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 NOXO1Q8NFA2 376 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 SLC25A40Q8TBP6 338 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 KLF14Q8TD94 323 aaPredicted RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 GEMIN6Q8WXD5 167 aaKnown RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 MAELQ96JY0 434 aaKnown RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 DCLRE1CQ96SD1 692 aaKnown RBP10.63□□□□□ -0.71
SKA3-206ENST00000475251 MCHR1Q99705 422 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 MMP27Q9H306 513 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 TMEM38AQ9H6F2 299 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 NANOGQ9H9S0 305 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 SIAEQ9HAT2 523 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 BEX1Q9HBH7 125 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 KCNK9Q9NPC2 374 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 TMEM106BQ9NUM4 274 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 EGFL7Q9UHF1 273 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 LRCH1Q9Y2L9 728 aa10.63□□□□□ -0.71
SKA3-206ENST00000475251 C5orf49A4QMS7 147 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 TRAPPC2LH3BP13 241 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 CRYBA1P05813 215 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 KITP10721 976 aa10.62□□□□□ -0.71
SKA3-206ENST00000475251 PCGF2P35227 344 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms