RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CATSPERDQ86XM0 798 aa8.78□□□□□ -1
USP39-214ENST00000474572 PLCZ1Q86YW0 608 aa8.78□□□□□ -1
USP39-214ENST00000474572 GTPBP8Q8N3Z3 284 aaPredicted RBP8.78□□□□□ -1
USP39-214ENST00000474572 OR4K17Q8NGC6 315 aa8.78□□□□□ -1
USP39-214ENST00000474572 OR6F1Q8NGZ6 308 aa8.78□□□□□ -1
USP39-214ENST00000474572 ENKURQ8TC29 256 aa8.78□□□□□ -1
USP39-214ENST00000474572 ST7LQ8TDW4 575 aa8.78□□□□□ -1
USP39-214ENST00000474572 YIPF5Q969M3 257 aa8.78□□□□□ -1
USP39-214ENST00000474572 SLC25A38Q96DW6 304 aa8.78□□□□□ -1
USP39-214ENST00000474572 CMKLR1Q99788 373 aa8.78□□□□□ -1
USP39-214ENST00000474572 ZPBPQ9BS86 351 aa8.78□□□□□ -1
USP39-214ENST00000474572 MARVELD1Q9BSK0 173 aa8.78□□□□□ -1
USP39-214ENST00000474572 SLITRK2Q9H156 845 aa8.78□□□□□ -1
USP39-214ENST00000474572 SLC25A18Q9H1K4 315 aa8.78□□□□□ -1
USP39-214ENST00000474572 MMP28Q9H239 520 aa8.78□□□□□ -1
USP39-214ENST00000474572 SMOC1Q9H4F8 434 aa8.78□□□□□ -1
USP39-214ENST00000474572 PTGES2Q9H7Z7 377 aa8.78□□□□□ -1
USP39-214ENST00000474572 PLEKHA1Q9HB21 404 aa8.78□□□□□ -1
USP39-214ENST00000474572 TEKT2Q9UIF3 430 aa8.78□□□□□ -1
USP39-214ENST00000474572 ING1Q9UK53 422 aaPredicted RBP8.78□□□□□ -1
USP39-214ENST00000474572 ETV7Q9Y603 341 aa8.78□□□□□ -1
USP39-214ENST00000474572 KIAA1549Q9HCM3 1950 aa8.78□□□□□ -1
USP39-214ENST00000474572 RALGAPA1Q6GYQ0 2036 aa8.78□□□□□ -1
USP39-214ENST00000474572 EML6Q6ZMW3 1958 aa8.77□□□□□ -1
USP39-214ENST00000474572 NSG1A0A0A6YYJ2 146 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 A0A0B4J203 849 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 A0A1B0GTH9 108 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 LANCL1O43813 399 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 STK17BO94768 372 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 PMS2P2O95744 297 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 WNT11O96014 354 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 PNPP00491 289 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 HLA-DQA2P01906 255 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 SPARCP09486 303 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 PGA4P0DJD7 388 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 PGA3P0DJD8 388 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 FSTP19883 344 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 SLC6A1P30531 599 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 DCTDP32321 178 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 BTCP35070 178 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 DDOSTP39656 456 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 MAGEB1P43366 347 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 SSR4P51571 173 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 RIDAP52758 137 aaKnown RBP8.77□□□□□ -1.01
USP39-214ENST00000474572 FMODQ06828 376 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 C19orf57Q0VDD7 668 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 MADCAM1Q13477 382 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 EIF2B1Q14232 305 aaKnown RBP8.77□□□□□ -1.01
USP39-214ENST00000474572 GPR176Q14439 515 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 SLC36A2Q495M3 483 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 DCAF12Q5T6F0 453 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 CDCP2Q5VXM1 449 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 TCEAL6Q6IPX3 200 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 H3F3CQ6NXT2 135 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 SLC25A47Q6Q0C1 308 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 PLET1Q6UQ28 207 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 HDDC2Q7Z4H3 204 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 PPP1R32Q7Z5V6 425 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 KDM8Q8N371 416 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 ZNF676Q8N7Q3 588 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 NOXO1Q8NFA2 376 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 OR10AC1Q8NH08 325 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 RAB40AQ8WXH6 277 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 ATOH1Q92858 354 aaPredicted RBP8.77□□□□□ -1.01
USP39-214ENST00000474572 TCEAL3Q969E4 200 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 MIB2Q96AX9 1013 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 ORAI1Q96D31 301 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 LIN37Q96GY3 246 aaPredicted RBP8.77□□□□□ -1.01
USP39-214ENST00000474572 TMEM41AQ96HV5 264 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 C5orf34Q96MH7 638 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 NECAB3Q96P71 396 aaPredicted RBP8.77□□□□□ -1.01
USP39-214ENST00000474572 C7orf50Q9BRJ6 194 aaKnown RBP8.77□□□□□ -1.01
USP39-214ENST00000474572 THAP7Q9BT49 309 aaPredicted RBP8.77□□□□□ -1.01
USP39-214ENST00000474572 DDA1Q9BW61 102 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 ARRDC1-AS1Q9H2J1 176 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 TCF7L1Q9HCS4 588 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 BRD7Q9NPI1 651 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 AKAP7Q9P0M2 348 aaPredicted RBP8.77□□□□□ -1.01
USP39-214ENST00000474572 OR5V1Q9UGF6 321 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 LOXL2Q9Y4K0 774 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 LRP12Q9Y561 859 aa8.77□□□□□ -1.01
USP39-214ENST00000474572 SDK1Q7Z5N4 2213 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 TRAV8-7A0A075B6U6 113 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 LINC00854A0A1B0GVQ3 168 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 LNP1A1A4G5 178 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 AQP7P3A6NL99 342 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 SULT1B1O43704 296 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 HPP00738 406 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 ISG15P05161 165 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 ADRB1P08588 477 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 CCL3P10147 92 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 CD59P13987 128 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 LIFP15018 202 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 ZNF17P17021 662 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 IGFBP3P17936 291 aaPredicted RBP8.76□□□□□ -1.01
USP39-214ENST00000474572 AGFG1P52594 562 aaKnown RBP8.76□□□□□ -1.01
USP39-214ENST00000474572 ZNF133P52736 654 aaPredicted RBP8.76□□□□□ -1.01
USP39-214ENST00000474572 BIDP55957 195 aa8.76□□□□□ -1.01
USP39-214ENST00000474572 DSCR4P56555 118 aaPredicted RBP8.76□□□□□ -1.01
USP39-214ENST00000474572 BTG1P62324 171 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms