RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ARHGAP24Q8N264 748 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 LRRC18Q8N456 261 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 ARIH2OSQ8N7S6 290 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 MAPK1IP1LQ8NDC0 245 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 SNX33Q8WV41 574 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 C11orf40Q8WZ69 217 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 HTRA1Q92743 480 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 HDAC2Q92769 488 aaKnown RBP17.67■□□□□ 0.42
SNX13-206ENST00000474067 PYURFQ96I23 114 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 SLCO1C1Q9NYB5 712 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 SNX13Q9Y5W8 968 aa17.67■□□□□ 0.42
SNX13-206ENST00000474067 VPS13CQ709C8 3753 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 SETD2Q9BYW2 2564 aaPredicted RBP17.66■□□□□ 0.42
SNX13-206ENST00000474067 TRAV27A0A087WT01 109 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 A0A1W2PPW3 197 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 C12orf71A8MTZ7 269 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 A8MV72 311 aaPredicted RBP17.66■□□□□ 0.42
SNX13-206ENST00000474067 PRSS23O95084 383 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 NDUFB2O95178 105 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 DAOP14920 347 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 MAKP20794 623 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 NR4A2P43354 598 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 RUNX1T1Q06455 604 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 SGCAQ16586 387 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 IQCCQ4KMZ1 466 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 CYB5R2Q6BCY4 276 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 WDFY1Q8IWB7 410 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 SLC7A13Q8TCU3 470 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 YAE1D1Q9NRH1 226 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 NDUFAF4Q9P032 175 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 REV1Q9UBZ9 1251 aa17.66■□□□□ 0.42
SNX13-206ENST00000474067 SH3PXD2BA1X283 911 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 CRLF1O75462 422 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 SLC2A10O95528 541 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 IFNA2P01563 188 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 CST2P09228 141 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 RPS6KA3P51812 740 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 KLF3P57682 345 aaPredicted RBP17.65■□□□□ 0.42
SNX13-206ENST00000474067 SLC25A47Q6Q0C1 308 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 ADCK1Q86TW2 530 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 OR13C2Q8NGS9 318 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 ZNF519Q8TB69 540 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 UBASH3BQ8TF42 649 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 NSMAFQ92636 917 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 ZNF570Q96NI8 536 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 MRPL37Q9BZE1 423 aaKnown RBP17.65■□□□□ 0.42
SNX13-206ENST00000474067 LPAR3Q9UBY5 353 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 TIMM10BQ9Y5J6 103 aa17.65■□□□□ 0.42
SNX13-206ENST00000474067 ARFGEF3Q5TH69 2177 aa17.64■□□□□ 0.42
SNX13-206ENST00000474067 LCKP06239 509 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 ADRA2AP08913 450 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 PATE4P0C8F1 98 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 TCN1P20061 433 aaPredicted RBP17.64■□□□□ 0.41
SNX13-206ENST00000474067 MSR1P21757 451 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 GPR4P46093 362 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 GDI2P50395 445 aaKnown RBP17.64■□□□□ 0.41
SNX13-206ENST00000474067 GGTLC2Q14390 218 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 NKPD1Q17RQ9 610 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 MTX3Q5HYI7 312 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 FAM209AQ5JX71 171 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 PODNL1Q6PEZ8 512 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 DNM1P34Q6PK57 102 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 ZNF584Q8IVC4 421 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 ZNF786Q8N393 782 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 LRRC75AQ8NAA5 344 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 SYNPRQ8TBG9 265 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 NMD3Q96D46 503 aaKnown RBP17.64■□□□□ 0.41
SNX13-206ENST00000474067 TSPAN32Q96QS1 320 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 CDRT15Q96T59 188 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 MUC13Q9H3R2 512 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 TMEM160Q9NX00 188 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 GMPR2Q9P2T1 348 aaKnown RBP17.64■□□□□ 0.41
SNX13-206ENST00000474067 DUSP13Q9UII6 198 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 CDC42EP3Q9UKI2 254 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 NDRG4Q9ULP0 352 aaKnown RBP17.64■□□□□ 0.41
SNX13-206ENST00000474067 TMCC3Q9ULS5 477 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 ALPK2Q86TB3 2170 aa17.64■□□□□ 0.41
SNX13-206ENST00000474067 A0A1W2PPL8 197 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 TMEM129A0AVI4 362 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 VWC2LB2RUY7 222 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 DYNC1I1O14576 645 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 GPRIN2O60269 458 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 GADD45GO95257 159 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 STAMBPO95630 424 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 FABP3P05413 133 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 MMP7P09237 267 aaPredicted RBP17.63■□□□□ 0.41
SNX13-206ENST00000474067 APEHP13798 732 aaKnown RBP17.63■□□□□ 0.41
SNX13-206ENST00000474067 STOMP27105 288 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 GIFP27352 417 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 SDHAP31040 664 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 ARHGDIAP52565 204 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 UCP2P55851 309 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 SCRN3Q0VDG4 424 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 PCGF3Q3KNV8 242 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 PABPC1L2AQ5JQF8 200 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 C6orf52Q5T4I8 152 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 PGM2L1Q6PCE3 622 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 IGFN1Q86VF2 1251 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 LINC00471Q8N535 108 aa17.63■□□□□ 0.41
SNX13-206ENST00000474067 RNF148Q8N7C7 305 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms