RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PAX2Q02962 417 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 FMODQ06828 376 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 ZMYND11Q15326 602 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 PAGE3Q5JUK9 113 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 FAM209AQ5JX71 171 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 CEP85LQ5SZL2 805 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 GCNT6Q5T4J0 391 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 REEP3Q6NUK4 255 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 TMEM53Q6P2H8 277 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 SNX32Q86XE0 403 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 FUNDC1Q8IVP5 155 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 KIR3DL3Q8N743 410 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 NABP1Q96AH0 204 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 TMIGD2Q96BF3 282 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 MRPL13Q9BYD1 178 aaKnown RBP10.61□□□□□ -0.71
TRAF4-209ENST00000473421 SLITRK2Q9H156 845 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 RMND5AQ9H871 391 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 CACYBPQ9HB71 228 aaKnown RBP10.61□□□□□ -0.71
TRAF4-209ENST00000473421 THUMPD1Q9NXG2 353 aaKnown RBP10.61□□□□□ -0.71
TRAF4-209ENST00000473421 ZIM2Q9NZV7 527 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 VAPAQ9P0L0 249 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 ARMCX1Q9P291 453 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 TESQ9UGI8 421 aaKnown RBP10.61□□□□□ -0.71
TRAF4-209ENST00000473421 POLR3KQ9Y2Y1 108 aaPredicted RBP10.61□□□□□ -0.71
TRAF4-209ENST00000473421 NPTNQ9Y639 398 aa10.61□□□□□ -0.71
TRAF4-209ENST00000473421 C5orf49A4QMS7 147 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 CPSF4LA6NMK7 179 aaKnown RBP10.6□□□□□ -0.71
TRAF4-209ENST00000473421 RNF13O43567 381 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 FOXH1O75593 365 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 MT-ATP6P00846 226 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 OPN1SWP03999 348 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 F13BP05160 661 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 THRBP10828 461 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 ZNF32P17041 273 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 STOMP27105 288 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 PAX8Q06710 450 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 FADDQ13158 208 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 DUSP7Q16829 419 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 KRT71Q3SY84 523 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 SLC36A2Q495M3 483 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 TNFAIP8L3Q5GJ75 292 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 HHATQ5VTY9 493 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 Q6ZR03 302 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 SPATC1Q76KD6 591 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 C1QL4Q86Z23 238 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 CLDN22Q8N7P3 220 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 OR6T1Q8NGN1 323 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 ST7LQ8TDW4 575 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 WFDC12Q8WWY7 111 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 NMD3Q96D46 503 aaKnown RBP10.6□□□□□ -0.71
TRAF4-209ENST00000473421 SIGLEC11Q96RL6 698 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 SEPHS2Q99611 448 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 MCHR1Q99705 422 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 ARHGDIGQ99819 225 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 PATZ1Q9HBE1 687 aaKnown RBP10.6□□□□□ -0.71
TRAF4-209ENST00000473421 KCNK9Q9NPC2 374 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 MEPEQ9NQ76 525 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-209ENST00000473421 TNFRSF19Q9NS68 423 aa10.6□□□□□ -0.71
TRAF4-209ENST00000473421 TRBV5-3A0A0A0MS03 114 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 IQCMA0A1B0GVH7 501 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 F5H0A9 414 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-209ENST00000473421 CLDN34H7C241 214 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 TRMUO75648 421 aaKnown RBP10.59□□□□□ -0.71
TRAF4-209ENST00000473421 ZNF205O95201 554 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 OR6A2O95222 327 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 FARS2O95363 451 aaKnown RBP10.59□□□□□ -0.71
TRAF4-209ENST00000473421 ADH4P08319 380 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 ASAH2BP0C7U1 165 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 APLNRP35414 380 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 ERFP50548 548 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 NCALDP61601 193 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 ERVK-25P63136 954 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 PSG4Q00888 419 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 PLP2Q04941 152 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 SCARB2Q14108 478 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 ZNF718Q3SXZ3 478 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 LRIF1Q5T3J3 769 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 MBNL2Q5VZF2 373 aaKnown RBP10.59□□□□□ -0.71
TRAF4-209ENST00000473421 HIST2H2BDQ6DRA6 164 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 MSANTD1Q6ZTZ1 278 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 LRRC28Q86X40 367 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-209ENST00000473421 ANKRD42Q8N9B4 389 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 OR1J2Q8NGS2 313 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRAF4-209ENST00000473421 SLC25A28Q96A46 364 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 PKP2Q99959 881 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 WNT5BQ9H1J7 359 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 SSU72Q9NP77 194 aaKnown RBP10.59□□□□□ -0.71
TRAF4-209ENST00000473421 TMEM106BQ9NUM4 274 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 SELENONQ9NZV5 590 aa10.59□□□□□ -0.71
TRAF4-209ENST00000473421 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 TRPC5OSA6NMA1 111 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 UBDO15205 165 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 RGS16O15492 202 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 HOXA3O43365 443 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 PLATP00750 562 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 SCG5P05408 212 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 CD55P08174 381 aa10.58□□□□□ -0.72
TRAF4-209ENST00000473421 ZNF133P52736 654 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-209ENST00000473421 UGT2B15P54855 530 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms