RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 MCIDASD6RGH6 385 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 PPIAL4DF5H284 164 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 TRMUO75648 421 aaKnown RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 OR7A10O76100 309 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 LCKP06239 509 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 PATE4P0C8F1 98 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 PPIAL4FP0DN26 164 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 ARFIP2P53365 341 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 SELPLGQ14242 412 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 MAD2L1BPQ15013 274 aaPredicted RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 HFEQ30201 348 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 ZNF718Q3SXZ3 478 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 ZMAT1Q5H9K5 638 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 THEM4Q5T1C6 240 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 MBNL2Q5VZF2 373 aaKnown RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 NANOGP8Q6NSW7 305 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 SYT9Q86SS6 491 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 TSPYL5Q86VY4 417 aaPredicted RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 ALDH16A1Q8IZ83 802 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 PAQR4Q8N4S7 273 aaPredicted RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 VANGL1Q8TAA9 524 aaPredicted RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 TMEM239Q8WW34 195 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 RAB1CQ92928 201 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 ZMYND19Q96E35 227 aaPredicted RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 ELMOD3Q96FG2 381 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 TIMD4Q96H15 378 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 POM121L2Q96KW2 1035 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 ZNF347Q96SE7 839 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 ECSITQ9BQ95 431 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 TXNIPQ9H3M7 391 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 METTL17Q9H7H0 456 aaPredicted RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 VIPAS39Q9H9C1 493 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 G6PC2Q9NQR9 355 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 DECR2Q9NUI1 292 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 EIF3KQ9UBQ5 218 aaKnown RBP11.55□□□□□ -0.56
CHD3-209ENST00000473376 RIMS3Q9UJD0 308 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 ZDHHC8Q9ULC8 765 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 HIF3AQ9Y2N7 669 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 MED31Q9Y3C7 131 aa11.55□□□□□ -0.56
CHD3-209ENST00000473376 A0A0G2JMP0 313 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 A0A0X1KG70 313 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 BBIP1A8MTZ0 92 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 CLDN25C9JDP6 229 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 EDF1O60869 148 aaKnown RBP11.54□□□□□ -0.56
CHD3-209ENST00000473376 CLPTM1O96005 669 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 IGHMP01871 453 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 FAM157BP0CG42 384 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 DRD4P21917 467 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 STOMP27105 288 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 IFNA8P32881 189 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 GUCA1AP43080 201 aaPredicted RBP11.54□□□□□ -0.56
CHD3-209ENST00000473376 MAGEB1P43366 347 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 LIMS1P48059 325 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 TAS2R41P59536 307 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 HILS1P60008 231 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 PCBD1P61457 104 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 CCL8P80075 99 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 HSF2Q03933 536 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 RUNX1T1Q06455 604 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 MELKQ14680 651 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 TTMPQ5BVD1 217 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 PABPC1L2AQ5JQF8 200 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 SHQ1Q6PI26 577 aaKnown RBP11.54□□□□□ -0.56
CHD3-209ENST00000473376 RINLQ6ZS11 566 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 ZER1Q7Z7L7 766 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 CARM1Q86X55 608 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 FAM156AQ8NDB6 213 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 OR4M2Q8NGB6 313 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 LRRC58Q96CX6 371 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 ZNF665Q9H7R5 613 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 CCNB1IP1Q9NPC3 277 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 TREM2Q9NZC2 230 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 FZR1Q9UM11 496 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 AP3M1Q9Y2T2 418 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 SH3GLB1Q9Y371 365 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 UGT2A1Q9Y4X1 527 aa11.54□□□□□ -0.56
CHD3-209ENST00000473376 PLSCR5A0PG75 271 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 KPNA4O00629 521 aaPredicted RBP11.53□□□□□ -0.56
CHD3-209ENST00000473376 WNT9BO14905 357 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 AHCYL1O43865 530 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 DEAF1O75398 565 aaPredicted RBP11.53□□□□□ -0.56
CHD3-209ENST00000473376 F13BP05160 661 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 CD55P08174 381 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 CPT2P23786 658 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 GCH1P30793 250 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 MMP15P51511 669 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 MAPRE2Q15555 327 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 ARL9Q6T311 187 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 C12orf54Q6X4T0 127 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 FOXL2NBQ6ZUU3 175 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 OR1J1Q8NGS3 322 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 NABP1Q96AH0 204 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 MARS2Q96GW9 593 aaKnown RBP11.53□□□□□ -0.56
CHD3-209ENST00000473376 RBP7Q96R05 134 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 RBM4Q9BWF3 364 aaKnown RBP11.53□□□□□ -0.56
CHD3-209ENST00000473376 EGLN1Q9GZT9 426 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 OCEL1Q9H607 264 aa11.53□□□□□ -0.56
CHD3-209ENST00000473376 SAP30LQ9HAJ7 183 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms