RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 HIST3H3Q16695 136 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 PAGE3Q5JUK9 113 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 REP15Q6BDI9 236 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 TMEM154Q6P9G4 183 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 ULK3Q6PHR2 472 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 Q6ZR03 302 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 SLC35D2Q76EJ3 337 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 TREML1Q86YW5 311 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 OR1J1Q8NGS3 322 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 OR5J2Q8NH18 312 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 OR6X1Q8NH79 312 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 BBS10Q8TAM1 723 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 NABP1Q96AH0 204 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 NMD3Q96D46 503 aaKnown RBP8.1□□□□□ -1.11
MCF2L-223ENST00000473345 RAB39BQ96DA2 213 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 POM121L2Q96KW2 1035 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 SIGLEC11Q96RL6 698 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 GAL3ST1Q99999 423 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 MRPL13Q9BYD1 178 aaKnown RBP8.1□□□□□ -1.11
MCF2L-223ENST00000473345 DENND2DQ9H6A0 471 aaPredicted RBP8.1□□□□□ -1.11
MCF2L-223ENST00000473345 SAP30LQ9HAJ7 183 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 MSL2Q9HCI7 577 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 SDR39U1Q9NRG7 319 aaPredicted RBP8.1□□□□□ -1.11
MCF2L-223ENST00000473345 VAPAQ9P0L0 249 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 RPS6KB2Q9UBS0 482 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 KLHL21Q9UJP4 597 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 NUP50Q9UKX7 468 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 INSIG2Q9Y5U4 225 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 TANC2Q9HCD6 1990 aa8.1□□□□□ -1.11
MCF2L-223ENST00000473345 ISPDA4D126 451 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 F5H0A9 414 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-223ENST00000473345 UBDO15205 165 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 AKAP8O43823 692 aaKnown RBP8.09□□□□□ -1.11
MCF2L-223ENST00000473345 SLC2A10O95528 541 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 GPANK1O95872 356 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 CH25HO95992 272 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 IL6P05231 212 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 ADORA3P0DMS8 318 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 THRBP10828 461 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 FUT4P22083 530 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 CD80P33681 288 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 ERFP50548 548 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 FMODQ06828 376 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 BAMBIQ13145 260 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 SCGB2A2Q13296 93 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 ZNF74Q16587 644 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 PCGF3Q3KNV8 242 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 PABPC1L2AQ5JQF8 200 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 C6orf10Q5SRN2 563 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 C5orf46Q6UWT4 87 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 CCDC121Q6ZUS5 278 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 CLDN22Q8N7P3 220 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 SMYD1Q8NB12 490 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 GLB1L3Q8NCI6 653 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-223ENST00000473345 AKR7LQ8NHP1 331 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 SLC25A40Q8TBP6 338 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 DNAJA4Q8WW22 397 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-223ENST00000473345 WFDC12Q8WWY7 111 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 MCHR2Q969V1 340 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 DACT3Q96B18 629 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-223ENST00000473345 SLC47A1Q96FL8 570 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 DCLRE1CQ96SD1 692 aaKnown RBP8.09□□□□□ -1.11
MCF2L-223ENST00000473345 SEPHS2Q99611 448 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 PRSS27Q9BQR3 290 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 TMEM43Q9BTV4 400 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 ASPNQ9BXN1 380 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 OR2J1Q9GZK6 312 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 ARMC7Q9H6L4 198 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 NTN4Q9HB63 628 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 CDH20Q9HBT6 801 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 B3GAT2Q9NPZ5 323 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 MEPEQ9NQ76 525 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-223ENST00000473345 ARL8BQ9NVJ2 186 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 PLEK2Q9NYT0 353 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 ARMCX1Q9P291 453 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 EGFL7Q9UHF1 273 aa8.09□□□□□ -1.11
MCF2L-223ENST00000473345 POLR3KQ9Y2Y1 108 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-223ENST00000473345 WNK2Q9Y3S1 2297 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 PPIAL4EA0A075B759 164 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 PPIAL4CA0A0B4J2A2 164 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ERICH4A6NGS2 130 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 PPIAL4DF5H284 164 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 KPNA4O00629 521 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 TPD52L2O43399 206 aaKnown RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ATP5HO75947 161 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 OPN1SWP03999 348 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 SCG5P05408 212 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ASAH2BP0C7U1 165 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 PPIAL4FP0DN26 164 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 IDO1P14902 403 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 ZNF32P17041 273 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 FPR2P25090 351 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 SLC6A9P48067 706 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 POLR2JP52435 117 aaKnown RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 CRYBA2P53672 197 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 RGS8P57771 180 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 HOXA4Q00056 320 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-223ENST00000473345 PAX8Q06710 450 aa8.08□□□□□ -1.12
MCF2L-223ENST00000473345 SELPLGQ14242 412 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms