RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 IGLV3-21P80748 117 aaPredicted RBP19.08■□□□□ 0.64
COL18A1-207ENST00000473212 FNDC7Q5VTL7 733 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 ZNF440Q8IYI8 595 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 PM20D2Q8IYS1 436 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 STK35Q8TDR2 534 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 LIPHQ8WWY8 451 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 ZNF578Q96N58 590 aaPredicted RBP19.08■□□□□ 0.64
COL18A1-207ENST00000473212 INTS14Q96SY0 518 aa19.08■□□□□ 0.64
COL18A1-207ENST00000473212 PNO1Q9NRX1 252 aaKnown RBP19.08■□□□□ 0.64
COL18A1-207ENST00000473212 KIR2DS5A0A0G2JLQ3 304 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 A0A0G2JNG1 304 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 C17orf105B2RV13 164 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 KIR2DS3K7RE56 304 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 NUPL2O15504 423 aaKnown RBP19.07■□□□□ 0.64
COL18A1-207ENST00000473212 TXNDC12O95881 172 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 FREM3P0C091 2139 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 GFERP55789 205 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 GMFBP60983 142 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 EGR3Q06889 387 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 KIR2DS5Q14953 304 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.07■□□□□ 0.64
COL18A1-207ENST00000473212 PRAMEF17Q5VTA0 474 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 KRT77Q7Z794 578 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 BVESQ8NE79 360 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 DUSP19Q8WTR2 217 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 C4orf45Q96LM5 186 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 DCBLD2Q96PD2 775 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 ADOQ96SZ5 270 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 MFFQ9GZY8 342 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 FBXL2Q9UKC9 423 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 MRPS33Q9Y291 106 aaKnown RBP19.07■□□□□ 0.64
COL18A1-207ENST00000473212 TACR3P29371 465 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 RASGEF1BQ0VAM2 473 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 CDH26Q8IXH8 852 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 PDZD9Q8IXQ8 264 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 DEFB119Q8N690 84 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.07■□□□□ 0.64
COL18A1-207ENST00000473212 FAM3DQ96BQ1 224 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 FBRSQ9HAH7 460 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 GTF2A1LQ9UNN4 478 aa19.07■□□□□ 0.64
COL18A1-207ENST00000473212 SPTY2D1-AS1A0A0U1RR47 76 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 FAM221BA6H8Z2 402 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 WNT11O96014 354 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 RENP00797 406 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 ZNF454Q8N9F8 522 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 TSLPQ969D9 159 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 OR8D2Q9GZM6 311 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 POFUT1Q9H488 388 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 GPR160Q9UJ42 338 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 SLC22A13Q9Y226 551 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 ATP6V1G2-DDX39BF2Z307 99 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 UBXN2BQ14CS0 331 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 RAB11BQ15907 218 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 ARHGAP40Q5TG30 622 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 EEF1A1P5Q5VTE0 462 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 STEAP1BQ6NZ63 245 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 CLEC1AQ8NC01 280 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 OR5M9Q8NGP3 310 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 RLN3Q8WXF3 142 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 ATG5Q9H1Y0 275 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 ELOVL3Q9HB03 270 aa19.06■□□□□ 0.64
COL18A1-207ENST00000473212 CLDN4O14493 209 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 RLN2P04090 185 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 RABIFP47224 123 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 CHRDL2Q6WN34 429 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 CFAP77Q6ZQR2 320 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 MDGA2Q7Z553 956 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 PLPP7Q8NBV4 271 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 ZNF563Q8TA94 476 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 TOE1Q96GM8 510 aaKnown RBP19.05■□□□□ 0.64
COL18A1-207ENST00000473212 LRRC61Q9BV99 259 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 S1PR5Q9H228 398 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 NUP210LQ5VU65 1888 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 CDC40O60508 579 aaKnown RBP eCLIP19.05■□□□□ 0.64
COL18A1-207ENST00000473212 TSPAN9O75954 239 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 UTS2O95399 124 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 EFNA3P52797 238 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 ETFDHQ16134 617 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 EMC4Q5J8M3 183 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 ASPHD2Q6ICH7 369 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 TFAP2EQ6VUC0 442 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 Q6ZS52 159 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 RELL2Q8NC24 303 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-207ENST00000473212 PTPMT1Q8WUK0 201 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-207ENST00000473212 GAL3ST4Q96RP7 486 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 CCNL2Q96S94 520 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-207ENST00000473212 GMEB2Q9UKD1 530 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 TMEM14AQ9Y6G1 99 aa19.05■□□□□ 0.64
COL18A1-207ENST00000473212 SRPX2O60687 465 aaPredicted RBP19.04■□□□□ 0.64
COL18A1-207ENST00000473212 SDC3O75056 442 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 ICOSLGO75144 302 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 HLA-DQA2P01906 255 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 OR1D4P47884 311 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 CENPAP49450 140 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 FOXL2P58012 376 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 ZNF273Q14593 569 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 MPPED2Q15777 294 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 MEP1BQ16820 701 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 FAM122CQ6P4D5 195 aa19.04■□□□□ 0.64
COL18A1-207ENST00000473212 GABRG1Q8N1C3 465 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms