RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 SLC43A1O75387 559 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 SULT1C4O75897 302 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 AQP8O94778 261 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 CRYABP02511 175 aaKnown RBP11.4□□□□□ -0.58
VPS13D-205ENST00000473099 FCGR2AP12318 317 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 GALP22466 123 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 LAP3P28838 519 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 GUCA1AP43080 201 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-205ENST00000473099 GBX2P52951 348 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-205ENST00000473099 ADAM8P78325 824 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 CCDC58Q4VC31 144 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 RNFT1Q5M7Z0 435 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 C10orf128Q5T292 105 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 SLC18B1Q6NT16 456 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 KCTD18Q6PI47 426 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-205ENST00000473099 SLC25A47Q6Q0C1 308 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 VASH1Q7L8A9 365 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-205ENST00000473099 PHC2Q8IXK0 858 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 TMEM123Q8N131 208 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 SLC26A10Q8NG04 563 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 OR10H5Q8NGA6 315 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 OR6N1Q8NGY5 312 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 OTOSQ8NHW6 89 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 RNF128Q8TEB7 428 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 SARAFQ96BY9 339 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 OR2M2Q96R28 347 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 TIMP4Q99727 224 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 TTYH2Q9BSA4 534 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 PRRG4Q9BZD6 226 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 PARPBPQ9NWS1 579 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 GLTPQ9NZD2 209 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 STUB1Q9UNE7 303 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 B3GNT3Q9Y2A9 372 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 COA3Q9Y2R0 106 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-205ENST00000473099 LIPGQ9Y5X9 500 aa11.4□□□□□ -0.58
VPS13D-205ENST00000473099 TVP23AA6NH52 213 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF724A8MTY0 619 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 J3QLW9 94 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF432O94892 652 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 KRT8P05787 483 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 GAAP10253 952 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF19P17023 458 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 KLK2P20151 261 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ALOX5APP20292 161 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 GABRA5P31644 462 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF84P51523 738 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 PMP22Q01453 160 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 SRYQ05066 204 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 FMODQ06828 376 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 SF3B4Q15427 424 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS13D-205ENST00000473099 SSX1Q16384 188 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 CTF1Q16619 201 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 TBR1Q16650 682 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 PCK2Q16822 640 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 RIPPLY2Q5TAB7 128 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 LIPKQ5VXJ0 399 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 DPY19L4Q7Z388 723 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ATCAYQ86WG3 371 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 KLBQ86Z14 1044 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ZIC4Q8N9L1 334 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ROBO4Q8WZ75 1007 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 MCHR2Q969V1 340 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 WDYHV1Q96HA8 205 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF845Q96IR2 970 aaPredicted RBP11.39□□□□□ -0.59
VPS13D-205ENST00000473099 C4orf36Q96KX1 117 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF385AQ96PM9 386 aaKnown RBP11.39□□□□□ -0.59
VPS13D-205ENST00000473099 PRDM14Q9GZV8 571 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 NAA50Q9GZZ1 169 aaKnown RBP11.39□□□□□ -0.59
VPS13D-205ENST00000473099 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 MRPL22Q9NWU5 206 aaKnown RBP11.39□□□□□ -0.59
VPS13D-205ENST00000473099 FOXD3Q9UJU5 478 aaPredicted RBP11.39□□□□□ -0.59
VPS13D-205ENST00000473099 SSR3Q9UNL2 185 aa11.39□□□□□ -0.59
VPS13D-205ENST00000473099 OR14I1A6ND48 311 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 METTL15A6NJ78 407 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF593O00488 134 aaPredicted RBP11.38□□□□□ -0.59
VPS13D-205ENST00000473099 PLPP2O43688 288 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 CD1AP06126 327 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 QDPRP09417 244 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 GADD45AP24522 165 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 TGM4P49221 684 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 OR12D2P58182 307 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 TUBA1BP68363 451 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 STK11Q15831 433 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 KCNMB1Q16558 191 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 ZNF544Q6NX49 715 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 DEGS2Q6QHC5 323 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 LYPD4Q6UWN0 246 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 TUBA1AQ71U36 451 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 AAED1Q7RTV5 226 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 MCEMP1Q8IX19 187 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 C20orf196Q8IYI0 205 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 RBMXL3Q8N7X1 1067 aaKnown RBP11.38□□□□□ -0.59
VPS13D-205ENST00000473099 KBTBD8Q8NFY9 601 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 ISG20L2Q9H9L3 353 aaKnown RBP11.38□□□□□ -0.59
VPS13D-205ENST00000473099 BCO1Q9HAY6 547 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 GLRX2Q9NS18 164 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 SPRR3Q9UBC9 169 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 TUBD1Q9UJT1 453 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 GNG8Q9UK08 70 aa11.38□□□□□ -0.59
VPS13D-205ENST00000473099 COPS3Q9UNS2 423 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms