RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 PCK1P35558 622 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 APOBEC1P41238 236 aaKnown RBP5.86□□□□□ -1.47
SCAF4-205ENST00000472318 GLIPR1P48060 266 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 CCT3P49368 545 aaKnown RBP5.86□□□□□ -1.47
SCAF4-205ENST00000472318 ARHGDIAP52565 204 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 CD81P60033 236 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 PKP1Q13835 747 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 CYLC2Q14093 348 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-205ENST00000472318 RCAN2Q14206 197 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 GRB7Q14451 532 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 KPNB1Q14974 876 aaKnown RBP5.86□□□□□ -1.47
SCAF4-205ENST00000472318 ARMCX4Q5H9R4 360 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 PDZK1Q5T2W1 519 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 NDUFAF5Q5TEU4 345 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 KCNIP4Q6PIL6 250 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 LACC1Q8IV20 430 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 ST13P4Q8IZP2 240 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-205ENST00000472318 RFLNBQ8N5W9 214 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 CSNK1A1LQ8N752 337 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 SPATA22Q8NHS9 363 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 ERGIC1Q969X5 290 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 IMP4Q96G21 291 aaKnown RBP5.86□□□□□ -1.47
SCAF4-205ENST00000472318 SGK494Q96LW2 274 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 TNFRSF13CQ96RJ3 184 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 NDEL1Q9GZM8 345 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 MFFQ9GZY8 342 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 FAM96AQ9H5X1 160 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 MTHFD2LQ9H903 347 aaPredicted RBP5.86□□□□□ -1.47
SCAF4-205ENST00000472318 HIF1ANQ9NWT6 349 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 AHSPQ9NZD4 102 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 MTCH1Q9NZJ7 389 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 RNF24Q9Y225 148 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 SLC22A14Q9Y267 594 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 ROS1P08922 2347 aa5.86□□□□□ -1.47
SCAF4-205ENST00000472318 DNAH3Q8TD57 4116 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 CCDC162PA2VCL2 907 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 STX7O15400 261 aaKnown RBP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 P2RX6O15547 441 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 HCN1O60741 890 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 H6PDO95479 791 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ERCC1P07992 297 aaPredicted RBP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 IGHV4-31P0DP07 118 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ATP1B2P14415 290 aaPredicted RBP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 CPN1P15169 458 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 GSTM3P21266 225 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 CCNOP22674 350 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 DCTDP32321 178 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 OPRM1P35372 400 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 XCR1P46094 333 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 FAM27E3Q08E93 113 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 EXOSC2Q13868 293 aaKnown RBP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 SLC10A1Q14973 349 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ABRAXAS2Q15018 415 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 NSDHLQ15738 373 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 SYPL1Q16563 259 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ALG10Q5BKT4 473 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 SLC25A53Q5H9E4 307 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 C6orf226Q5I0X4 101 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ALG10BQ5I7T1 473 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 NCBP2-AS2Q69YL0 99 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 CAPN13Q6MZZ7 669 aaPredicted RBP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 CCDC137Q6PK04 289 aaKnown RBP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 PRSS41Q7RTY9 318 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 TMEM123Q8N131 208 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 TMEM156Q8N614 296 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ZNF441Q8N8Z8 693 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 OR9A4Q8NGU2 314 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 OR51Q1Q8NH59 317 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 TNFRSF14Q92956 283 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 SLC38A4Q969I6 547 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 MRPL53Q96EL3 112 aaKnown RBP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 DCUN1D1Q96GG9 259 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 TECTBQ96PL2 329 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 KRT12Q99456 494 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 NDUFAF3Q9BU61 184 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 C20orf24Q9BUV8 137 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ROGDIQ9GZN7 287 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 DRC3Q9H069 523 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 KCNN2Q9H2S1 579 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 GAL3ST2Q9H3Q3 398 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 IL1RL2Q9HB29 575 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 MBD2Q9UBB5 411 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ZNF639Q9UID6 485 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 ZNF346Q9UL40 294 aaKnown RBP5.85□□□□□ -1.47
SCAF4-205ENST00000472318 LAMP3Q9UQV4 416 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 PRELID1Q9Y255 219 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 WDR83OSQ9Y284 106 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 DSCAMO60469 2012 aa5.85□□□□□ -1.47
SCAF4-205ENST00000472318 SNRNP200O75643 2136 aaKnown RBP5.84□□□□□ -1.47
SCAF4-205ENST00000472318 TRBV5-7A0A0A0MS05 114 aa5.84□□□□□ -1.47
SCAF4-205ENST00000472318 LOC390937A0A1W2PQ73 354 aa5.84□□□□□ -1.47
SCAF4-205ENST00000472318 SYT7O43581 403 aa5.84□□□□□ -1.47
SCAF4-205ENST00000472318 GLRA3O75311 464 aa5.84□□□□□ -1.47
SCAF4-205ENST00000472318 STX11O75558 287 aa5.84□□□□□ -1.47
SCAF4-205ENST00000472318 CDC123O75794 336 aaPredicted RBP5.84□□□□□ -1.47
SCAF4-205ENST00000472318 SRP72O76094 671 aaKnown RBP5.84□□□□□ -1.47
SCAF4-205ENST00000472318 CD48P09326 243 aa5.84□□□□□ -1.47
SCAF4-205ENST00000472318 ANXA4P09525 319 aaPredicted RBP5.84□□□□□ -1.47
SCAF4-205ENST00000472318 UCHL3P15374 230 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms