RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 H7C417 338 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 TNFRSF11BO00300 401 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 XKRYO14609 159 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 ACOT8O14734 319 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 SMAD7O15105 426 aaKnown RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 AHCYL1O43865 530 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 SSX4O60224 188 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 STAMBPO95630 424 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 PTHP01270 115 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 MMP7P09237 267 aaPredicted RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 SDHAP31040 664 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 IFNGR2P38484 337 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 GUCA1AP43080 201 aaPredicted RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 MAGEA2P43356 314 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 LCN6P62502 163 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 TRAP1Q12931 704 aaKnown RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 SNTB2Q13425 540 aaKnown RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 TNK1Q13470 666 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 EFNB3Q15768 340 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 RFX4Q33E94 735 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 FAM98BQ52LJ0 330 aaKnown RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 MESTQ5EB52 335 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 FAM27BQ5VT28 67 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 GPR139Q6DWJ6 353 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 SMARCD3Q6STE5 483 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 DPY19L2P2Q6ZN68 376 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 POP5Q969H6 163 aaKnown RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 CCDC124Q96CT7 223 aaKnown RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 SLC7A6OSQ96CW6 309 aaPredicted RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 RASD2Q96D21 266 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 LRGUKQ96M69 825 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 GPX7Q96SL4 187 aaPredicted RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 DOK1Q99704 481 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 SMR3AQ99954 134 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 BTBD10Q9BSF8 475 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 SPEF1Q9Y4P9 236 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 ANKRD17O75179 2603 aaKnown RBP7.91□□□□□ -1.14
SYN3-211ENST00000472027 VPS13CQ709C8 3753 aa7.91□□□□□ -1.14
SYN3-211ENST00000472027 AKAP6Q13023 2319 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 IQCMA0A1B0GVH7 501 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 A0A1W2PPL8 197 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 TMEM129A0AVI4 362 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 PRSS37A4D1T9 235 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 SOCS2O14508 198 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 IMPA2O14732 288 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 GPRIN2O60269 458 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 F12P00748 615 aaPredicted RBP7.9□□□□□ -1.14
SYN3-211ENST00000472027 GASTP01350 101 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 SCG5P05408 212 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 CCL2P13500 99 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 ZNF32P17041 273 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 FPR3P25089 353 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 LAP3P28838 519 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 GLRXP35754 106 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 CDKN2AP42771 156 aaKnown RBP7.9□□□□□ -1.14
SYN3-211ENST00000472027 GSSP48637 474 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 RPS6KA3P51812 740 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 NUDT6P53370 316 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 SNRPD2P62316 118 aaKnown RBP7.9□□□□□ -1.14
SYN3-211ENST00000472027 GALK2Q01415 458 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 PLP2Q04941 152 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 PPP1R8Q12972 351 aaKnown RBP7.9□□□□□ -1.14
SYN3-211ENST00000472027 TSPAN31Q12999 210 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 KRR1Q13601 381 aaKnown RBP7.9□□□□□ -1.14
SYN3-211ENST00000472027 DNAL1Q4LDG9 190 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 PABPC1L2AQ5JQF8 200 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 PGBD2Q6P3X8 592 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 PGM2L1Q6PCE3 622 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 DNM1P46Q6ZS02 220 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 FOXL2NBQ6ZUU3 175 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 BIVMQ86UB2 503 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 LINC00471Q8N535 108 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 CPEB3Q8NE35 698 aaKnown RBP7.9□□□□□ -1.14
SYN3-211ENST00000472027 SLC30A7Q8NEW0 376 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 OR4C15Q8NGM1 316 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 OR1J2Q8NGS2 313 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 COX4I2Q96KJ9 171 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 ERMAPQ96PL5 475 aaPredicted RBP7.9□□□□□ -1.14
SYN3-211ENST00000472027 VRK1Q99986 396 aaPredicted RBP7.9□□□□□ -1.14
SYN3-211ENST00000472027 TRIM15Q9C019 465 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 OR52D1Q9H346 318 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 C1orf198Q9H425 327 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 PLK3Q9H4B4 646 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 CCNB1IP1Q9NPC3 277 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 SLC7A8Q9UHI5 535 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 CMAHPQ9Y471 501 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 LYVE1Q9Y5Y7 322 aa7.9□□□□□ -1.14
SYN3-211ENST00000472027 MYO9AB2RTY4 2548 aa7.9□□□□□ -1.15
SYN3-211ENST00000472027 ALPK2Q86TB3 2170 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 GSC2O15499 205 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 SLC16A7O60669 478 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 KHDRBS3O75525 346 aaKnown RBP7.89□□□□□ -1.15
SYN3-211ENST00000472027 DNAJC8O75937 253 aaPredicted RBP7.89□□□□□ -1.15
SYN3-211ENST00000472027 LY6HO94772 140 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 CCNB2O95067 398 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 PPP1R3DO95685 299 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 TXNDC12O95881 172 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 CST2P09228 141 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 RAP2AP10114 183 aa7.89□□□□□ -1.15
SYN3-211ENST00000472027 APEHP13798 732 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms