RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 BAZ1AQ9NRL2 1556 aaPredicted RBP2.57□□□□□ -2
CD46-213ENST00000471987 WDR97A6NE52 1622 aa2.57□□□□□ -2
CD46-213ENST00000471987 FBLL1A6NHQ2 334 aaKnown RBP2.57□□□□□ -2
CD46-213ENST00000471987 ANKRD30BLA7E2S9 258 aa2.57□□□□□ -2
CD46-213ENST00000471987 A8MUA0 341 aa2.57□□□□□ -2
CD46-213ENST00000471987 SERPINE3A8MV23 424 aa2.57□□□□□ -2
CD46-213ENST00000471987 PRAMEF26H0Y7S4 382 aa2.57□□□□□ -2
CD46-213ENST00000471987 FOXE1O00358 373 aaPredicted RBP2.57□□□□□ -2
CD46-213ENST00000471987 STX7O15400 261 aaKnown RBP2.57□□□□□ -2
CD46-213ENST00000471987 SUPT7LO94864 414 aa2.57□□□□□ -2
CD46-213ENST00000471987 OR4F21O95013 312 aa2.57□□□□□ -2
CD46-213ENST00000471987 FTH1P02794 183 aa2.57□□□□□ -2
CD46-213ENST00000471987 SERPIND1P05546 499 aa2.57□□□□□ -2
CD46-213ENST00000471987 DBTP11182 482 aaKnown RBP2.57□□□□□ -2
CD46-213ENST00000471987 MAGP20916 626 aa2.57□□□□□ -2
CD46-213ENST00000471987 GSTM3P21266 225 aa2.57□□□□□ -2
CD46-213ENST00000471987 DTYMKP23919 212 aa2.57□□□□□ -2
CD46-213ENST00000471987 CMA1P23946 247 aa2.57□□□□□ -2
CD46-213ENST00000471987 PRDX6P30041 224 aa2.57□□□□□ -2
CD46-213ENST00000471987 MAS1LP35410 378 aa2.57□□□□□ -2
CD46-213ENST00000471987 SLC1A1P43005 524 aa2.57□□□□□ -2
CD46-213ENST00000471987 CAPZBP47756 277 aa2.57□□□□□ -2
CD46-213ENST00000471987 RAG2P55895 527 aa2.57□□□□□ -2
CD46-213ENST00000471987 CXCR4P61073 352 aa2.57□□□□□ -2
CD46-213ENST00000471987 AP1S1P61966 158 aa2.57□□□□□ -2
CD46-213ENST00000471987 CDK16Q00536 496 aa2.57□□□□□ -2
CD46-213ENST00000471987 CNTN2Q02246 1040 aa2.57□□□□□ -2
CD46-213ENST00000471987 BDH1Q02338 343 aa2.57□□□□□ -2
CD46-213ENST00000471987 CHRNB3Q05901 458 aa2.57□□□□□ -2
CD46-213ENST00000471987 SIGLEC14Q08ET2 396 aa2.57□□□□□ -2
CD46-213ENST00000471987 MADCAM1Q13477 382 aa2.57□□□□□ -2
CD46-213ENST00000471987 SMCO1Q147U7 214 aa2.57□□□□□ -2
CD46-213ENST00000471987 PON3Q15166 354 aa2.57□□□□□ -2
CD46-213ENST00000471987 TMED2Q15363 201 aa2.57□□□□□ -2
CD46-213ENST00000471987 C5orf64Q2M2E5 130 aa2.57□□□□□ -2
CD46-213ENST00000471987 ALKBH6Q3KRA9 238 aa2.57□□□□□ -2
CD46-213ENST00000471987 CTSL3PQ5NE16 218 aa2.57□□□□□ -2
CD46-213ENST00000471987 C6orf183Q5T699 404 aa2.57□□□□□ -2
CD46-213ENST00000471987 C1orf146Q5VVC0 180 aa2.57□□□□□ -2
CD46-213ENST00000471987 METTL21CQ5VZV1 264 aa2.57□□□□□ -2
CD46-213ENST00000471987 TTC23Q5W5X9 447 aa2.57□□□□□ -2
CD46-213ENST00000471987 TIGD3Q6B0B8 471 aa2.57□□□□□ -2
CD46-213ENST00000471987 ZSCAN25Q6NSZ9 544 aa2.57□□□□□ -2
CD46-213ENST00000471987 CLEC18BQ6UXF7 455 aa2.57□□□□□ -2
CD46-213ENST00000471987 Q6ZPB1 254 aaPredicted RBP2.57□□□□□ -2
CD46-213ENST00000471987 LRRC74BQ6ZQY2 392 aa2.57□□□□□ -2
CD46-213ENST00000471987 ARCQ7LC44 396 aa2.57□□□□□ -2
CD46-213ENST00000471987 C16orf62Q7Z3J2 963 aa2.57□□□□□ -2
CD46-213ENST00000471987 LHFPL4Q7Z7J7 247 aa2.57□□□□□ -2
CD46-213ENST00000471987 SCD5Q86SK9 330 aa2.57□□□□□ -2
CD46-213ENST00000471987 SLC26A11Q86WA9 606 aa2.57□□□□□ -2
CD46-213ENST00000471987 SLC38A6Q8IZM9 456 aa2.57□□□□□ -2
CD46-213ENST00000471987 GCNT2Q8N0V5 402 aa2.57□□□□□ -2
CD46-213ENST00000471987 CYB561A3Q8NBI2 242 aa2.57□□□□□ -2
CD46-213ENST00000471987 NECAP1Q8NC96 275 aa2.57□□□□□ -2
CD46-213ENST00000471987 MCHR2Q969V1 340 aa2.57□□□□□ -2
CD46-213ENST00000471987 COQ2Q96H96 371 aa2.57□□□□□ -2
CD46-213ENST00000471987 TMEM101Q96IK0 257 aa2.57□□□□□ -2
CD46-213ENST00000471987 GLT1D1Q96MS3 346 aa2.57□□□□□ -2
CD46-213ENST00000471987 RNF145Q96MT1 663 aa2.57□□□□□ -2
CD46-213ENST00000471987 GPR137Q96N19 417 aa2.57□□□□□ -2
CD46-213ENST00000471987 OLFM3Q96PB7 478 aa2.57□□□□□ -2
CD46-213ENST00000471987 CSPG4P5Q96PW8 444 aa2.57□□□□□ -2
CD46-213ENST00000471987 TSC22D3Q99576 134 aa2.57□□□□□ -2
CD46-213ENST00000471987 TMEM246Q9BRR3 403 aa2.57□□□□□ -2
CD46-213ENST00000471987 MED10Q9BTT4 135 aa2.57□□□□□ -2
CD46-213ENST00000471987 FTHL17Q9BXU8 183 aa2.57□□□□□ -2
CD46-213ENST00000471987 ROPN1BQ9BZX4 212 aaPredicted RBP2.57□□□□□ -2
CD46-213ENST00000471987 NXF3Q9H4D5 531 aaKnown RBP2.57□□□□□ -2
CD46-213ENST00000471987 MEPEQ9NQ76 525 aaPredicted RBP2.57□□□□□ -2
CD46-213ENST00000471987 YAE1D1Q9NRH1 226 aa2.57□□□□□ -2
CD46-213ENST00000471987 INIPQ9NRY2 104 aa2.57□□□□□ -2
CD46-213ENST00000471987 PIGVQ9NUD9 493 aa2.57□□□□□ -2
CD46-213ENST00000471987 UFSP2Q9NUQ7 469 aa2.57□□□□□ -2
CD46-213ENST00000471987 IMP3Q9NV31 184 aaKnown RBP2.57□□□□□ -2
CD46-213ENST00000471987 EHFQ9NZC4 300 aa2.57□□□□□ -2
CD46-213ENST00000471987 ADA2Q9NZK5 511 aa2.57□□□□□ -2
CD46-213ENST00000471987 UVRAGQ9P2Y5 699 aa2.57□□□□□ -2
CD46-213ENST00000471987 PISDQ9UG56 409 aa2.57□□□□□ -2
CD46-213ENST00000471987 STOML2Q9UJZ1 356 aa2.57□□□□□ -2
CD46-213ENST00000471987 C3orf18Q9UK00 162 aa2.57□□□□□ -2
CD46-213ENST00000471987 SCML1Q9UN30 329 aa2.57□□□□□ -2
CD46-213ENST00000471987 SCML2Q9UQR0 700 aa2.57□□□□□ -2
CD46-213ENST00000471987 POFUT2Q9Y2G5 429 aa2.57□□□□□ -2
CD46-213ENST00000471987 KLHDC2Q9Y2U9 406 aa2.57□□□□□ -2
CD46-213ENST00000471987 PRG3Q9Y2Y8 225 aaPredicted RBP2.57□□□□□ -2
CD46-213ENST00000471987 ABCC4O15439 1325 aa2.57□□□□□ -2
CD46-213ENST00000471987 UBN2Q6ZU65 1347 aa2.57□□□□□ -2
CD46-213ENST00000471987 PCDH11XQ9BZA7 1347 aa2.57□□□□□ -2
CD46-213ENST00000471987 LRPPRCP42704 1394 aaKnown RBP2.57□□□□□ -2
CD46-213ENST00000471987 ARAP1Q96P48 1450 aa2.57□□□□□ -2
CD46-213ENST00000471987 MRC2Q9UBG0 1479 aa2.57□□□□□ -2
CD46-213ENST00000471987 BAZ1BQ9UIG0 1483 aaKnown RBP2.57□□□□□ -2
CD46-213ENST00000471987 IGLV4-60A0A075B6I1 120 aa2.56□□□□□ -2
CD46-213ENST00000471987 KIR2DL5BA0A0G2JN68 375 aa2.56□□□□□ -2
CD46-213ENST00000471987 KIR2DL5BA0A0G2JPC4 375 aa2.56□□□□□ -2
CD46-213ENST00000471987 ESYT2A0FGR8 921 aa2.56□□□□□ -2
CD46-213ENST00000471987 TMEM213A2RRL7 107 aa2.56□□□□□ -2
CD46-213ENST00000471987 ZNF233A6NK53 670 aa2.56□□□□□ -2
CD46-213ENST00000471987 ZNF729A6NN14 1252 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms