RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 IGHA1P01876 353 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 SBK2P0C263 348 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 CDH2P19022 906 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 GRNP28799 593 aaKnown RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 GTF2E2P29084 291 aaKnown RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 MRPS34P82930 218 aaKnown RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 IL5RAQ01344 420 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 ROR2Q01974 943 aaKnown RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 APOFQ13790 326 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 GABRA6Q16445 453 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 CEACAM16Q2WEN9 425 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 C4orf17Q53FE4 359 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 OR2A2Q6IF42 318 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 CASP12Q6UXS9 341 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 Q6ZT83 130 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 CDC20BQ86Y33 519 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 ZNF584Q8IVC4 421 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 SKA3Q8IX90 412 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 C8orf59Q8N0T1 100 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 ZNF555Q8NEP9 628 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 OR4F15Q8NGB8 312 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 OR52I1Q8NGK6 324 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 ST7LQ8TDW4 575 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 ZMYND19Q96E35 227 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 MAP6Q96JE9 813 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 CNBD2Q96M20 576 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 ZFP3Q96NJ6 502 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 FGF20Q9NP95 211 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 POLE4Q9NR33 117 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 TMEM38BQ9NVV0 291 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 TAS2R16Q9NYV7 291 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 COMMD3-BMI1R4GMX3 469 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 RP1L1Q8IWN7 2480 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-207ENST00000471342 ARHGAP21Q5T5U3 1957 aa8.66□□□□□ -1.02
SF3A1-207ENST00000471342 FLNCQ14315 2725 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 C5orf63A6NC05 138 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 PRR23D1E9PI22 279 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 CCL21O00585 134 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 MSTNO14793 375 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 LRRTM2O43300 516 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 SELENOFO60613 162 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 SLC43A1O75387 559 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 SRSF10O75494 262 aaKnown RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 KHDRBS3O75525 346 aaKnown RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 SEC14L2O76054 403 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 APOL3O95236 402 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 ABHD16AO95870 558 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 HRGP04196 525 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 THBDP07204 575 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 CCDC159P0C7I6 412 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 PATE4P0C8F1 98 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 LIMS3P0CW19 117 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 LIMS4P0CW20 117 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 PRR23D2P0DMB1 279 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 ALOX5APP20292 161 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 PCMT1P22061 227 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 LAP3P28838 519 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 C21orf33P30042 268 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 CSNK1A1P48729 337 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 CDC42P60953 191 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 ARF1P84077 181 aaKnown RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 HSF2Q03933 536 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 HGFACQ04756 655 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 FAM27E3Q08E93 113 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 CCDC92Q53HC0 331 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 SLC35D3Q5M8T2 416 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 FAM27BQ5VT28 67 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 GTF2IRD2BQ6EKJ0 949 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 SLC18B1Q6NT16 456 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 CHMP1BQ7LBR1 199 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 SHFQ7M4L6 423 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 GTF2IRD2Q86UP8 949 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 MYPOPQ86VE0 399 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 FJX1Q86VR8 437 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 DEPDC4Q8N2C3 294 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 POMGNT2Q8NAT1 580 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 OR1K1Q8NGR3 316 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 LILRB4Q8NHJ6 448 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 NSMAFQ92636 917 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 APH1AQ96BI3 265 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 SLC38A2Q96QD8 506 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 PRRG4Q9BZD6 226 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 OR51V1Q9H2C8 321 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 EMC7Q9NPA0 242 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 NPDC1Q9NQX5 325 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 EMC3Q9P0I2 261 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 CLEC2DQ9UHP7 191 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 CYB5R1Q9UHQ9 305 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 MOKQ9UQ07 419 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 LSM2Q9Y333 95 aaKnown RBP8.65□□□□□ -1.02
SF3A1-207ENST00000471342 ORC6Q9Y5N6 252 aa8.65□□□□□ -1.02
SF3A1-207ENST00000471342 INTS1Q8N201 2190 aaKnown RBP8.65□□□□□ -1.03
SF3A1-207ENST00000471342 SH3D21A4FU49 640 aa8.64□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF726A6NNF4 738 aa8.64□□□□□ -1.03
SF3A1-207ENST00000471342 RIIAD1A6NNX1 92 aa8.64□□□□□ -1.03
SF3A1-207ENST00000471342 HSPB2A8KAH6 182 aa8.64□□□□□ -1.03
SF3A1-207ENST00000471342 ZNF99A8MXY4 864 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-207ENST00000471342 MAGEB4O15481 346 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-207ENST00000471342 IL2RAP01589 272 aa8.64□□□□□ -1.03
SF3A1-207ENST00000471342 PIPP12273 146 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms