RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CD300LDQ6UXZ3 194 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 B3GLCTQ6Y288 498 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 C20orf204Q6ZNR8 217 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 YTHDF3Q7Z739 585 aaKnown RBP17.18■□□□□ 0.34
HDAC7-220ENST00000471235 NINJ1Q92982 152 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 ZNF75AQ96N20 296 aa17.18■□□□□ 0.34
HDAC7-220ENST00000471235 A0A1W2PPL8 197 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 HIST1H1CP16403 213 aaKnown RBP17.17■□□□□ 0.34
HDAC7-220ENST00000471235 NPR2P20594 1047 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 PTDSS1P48651 473 aaKnown RBP17.17■□□□□ 0.34
HDAC7-220ENST00000471235 NAAAQ02083 359 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 ETFDHQ16134 617 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 SLC16A14Q7RTX9 510 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 JAZF1Q86VZ6 243 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 ZNF611Q8N823 705 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 OR4Q3Q8NH05 313 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 OR4K13Q8NH42 304 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 FBXW5Q969U6 566 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 RADILQ96JH8 1075 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 SNX18Q96RF0 628 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 SIAEQ9HAT2 523 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 REV1Q9UBZ9 1251 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 MOKQ9UQ07 419 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 CSMD1Q96PZ7 3565 aa17.17■□□□□ 0.34
HDAC7-220ENST00000471235 IDH3BO43837 385 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 RAB36O95755 333 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 FCGR1AP12314 374 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 ZNF14P17017 642 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-220ENST00000471235 CD53P19397 219 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 PRKACGP22612 351 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 DNASE1P24855 282 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 FASP25445 335 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 NOS3P29474 1203 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 CALCRP30988 508 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 GIPRP48546 466 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 RAB1AP62820 205 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 COX10Q12887 443 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 KEAP1Q14145 624 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 SGCAQ16586 387 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 SLC35F1Q5T1Q4 408 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 LEG1Q6P5S2 330 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 LRRC18Q8N456 261 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 SDR9C7Q8NEX9 313 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 PYDC1Q8WXC3 89 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 NRBF2Q96F24 287 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 MS4A3Q96HJ5 214 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 RAB3IPQ96QF0 476 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-220ENST00000471235 NMNAT3Q96T66 252 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 TSSK6Q9BXA6 273 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 POLE4Q9NR33 117 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 POU2F3Q9UKI9 436 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 EDARQ9UNE0 448 aa17.16■□□□□ 0.34
HDAC7-220ENST00000471235 PRRC2AP48634 2157 aaKnown RBP17.16■□□□□ 0.34
HDAC7-220ENST00000471235 MYO9AB2RTY4 2548 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 E7EQL1 145 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 SLC16A7O60669 478 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 MMP7P09237 267 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-220ENST00000471235 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.15■□□□□ 0.34
HDAC7-220ENST00000471235 SLC36A2Q495M3 483 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 SLC36A3Q495N2 470 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 TMEM53Q6P2H8 277 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 DPPA2Q7Z7J5 298 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 AMIGO2Q86SJ2 522 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 OR5K1Q8NHB7 308 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 LRTOMTQ8WZ04 291 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 FOXN4Q96NZ1 517 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 CCL19Q99731 98 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 KCNS3Q9BQ31 491 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 NUAK2Q9H093 628 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 FN3KQ9H479 309 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 ATP23Q9Y6H3 246 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 ARFGEF3Q5TH69 2177 aa17.15■□□□□ 0.34
HDAC7-220ENST00000471235 IGHV2OR16-5A0A0B4J2B6 119 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 MGRN1O60291 552 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 KHDRBS3O75525 346 aaKnown RBP17.14■□□□□ 0.33
HDAC7-220ENST00000471235 RENP00797 406 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 CRYAAP02489 173 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 SCG5P05408 212 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 ANXA8P13928 327 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 MSR1P21757 451 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 ARHGDIAP52565 204 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 RAB39AQ14964 217 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 FAM27BQ5VT28 67 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 FAHD1Q6P587 224 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 ZNF584Q8IVC4 421 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 DEPDC4Q8N2C3 294 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 LNX2Q8N448 690 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 ATG16L2Q8NAA4 619 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 OR52E2Q8NGJ4 325 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 TEX47Q8TBZ9 253 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 IGFBPL1Q8WX77 278 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 TSSK2Q96PF2 358 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 RERGLQ9H628 205 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 RNF121Q9H920 327 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 ZNF556Q9HAH1 456 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 CISD1Q9NZ45 108 aaKnown RBP17.14■□□□□ 0.33
HDAC7-220ENST00000471235 KIF17Q9P2E2 1029 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 FBXL3Q9UKT7 428 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 BAIAP2Q9UQB8 552 aa17.14■□□□□ 0.33
HDAC7-220ENST00000471235 RTTNQ86VV8 2226 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms