RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CXCL13O43927 109 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RAB36O95755 333 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 IGHG1P01857 330 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 CDK1P06493 297 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 DBTP11182 482 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 HIST1H1CP16403 213 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 MYL12AP19105 171 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 GNLYP22749 145 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ACVR1BP36896 505 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RFC3P40938 356 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 SLC15A1P46059 708 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RPL5P46777 297 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 CAPZA2P47755 286 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 LHX2P50458 406 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 SLC16A1P53985 500 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 CLDN15P56746 228 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 CLDN18P56856 261 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 CLDN20P56880 219 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RPS7P62081 194 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ACTC1P68032 377 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ACTA1P68133 377 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 POU3F1Q03052 451 aaPredicted RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ZNF91Q05481 1191 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ST3GAL4Q11206 333 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 KLRB1Q12918 225 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 APOFQ13790 326 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 BLMHQ13867 455 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 CRMP1Q14194 572 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RNPS1Q15287 305 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 GXYLT1Q4G148 440 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RNLSQ5VYX0 342 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 LAIR2Q6ISS4 152 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 PLBD1Q6P4A8 553 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 LEG1Q6P5S2 330 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 FAM180AQ6UWF9 173 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 AHSA2Q719I0 299 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 TRILQ7L0X0 811 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 GPAT4Q86UL3 456 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 EGFL6Q8IUX8 553 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 UBQLNLQ8IYU4 475 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RBMXL3Q8N7X1 1067 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 SLC37A3Q8NCC5 494 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 NPEPL1Q8NDH3 523 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 SDR9C7Q8NEX9 313 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 OR6X1Q8NH79 312 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 OR10D3Q8NH80 312 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ZNF519Q8TB69 540 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 SSC4DQ8WTU2 575 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ASB10Q8WXI3 467 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 INTS12Q96CB8 462 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RASD2Q96D21 266 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RCC1LQ96I51 464 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ADGRG7Q96K78 797 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 TSPAN32Q96QS1 320 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RBP7Q96R05 134 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 JMJD8Q96S16 334 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 MNTQ99583 582 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 CCDC90BQ9GZT6 254 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RACGAP1Q9H0H5 632 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ENKD1Q9H0I2 346 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RNF122Q9H9V4 155 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 FGF20Q9NP95 211 aaPredicted RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 HINT3Q9NQE9 182 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 INPP5EQ9NRR6 644 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 FKBP14Q9NWM8 211 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 EMC3Q9P0I2 261 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 NDUFA13Q9P0J0 144 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 KLHL9Q9P2J3 617 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 CGGBP1Q9UFW8 167 aaPredicted RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ZNF346Q9UL40 294 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 RCE1Q9Y256 329 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 GPR52Q9Y2T5 361 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 EXOSC1Q9Y3B2 195 aaKnown RBP5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ADAM18Q9Y3Q7 739 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 ZNF175Q9Y473 711 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 FKBP7Q9Y680 259 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 F8P00451 2351 aa5.9□□□□□ -1.46
VAMP3-202ENST00000470357 MTORP42345 2549 aa5.9□□□□□ -1.47
VAMP3-202ENST00000470357 ALPK2Q86TB3 2170 aa5.9□□□□□ -1.47
VAMP3-202ENST00000470357 HIVEP1P15822 2718 aa5.9□□□□□ -1.47
VAMP3-202ENST00000470357 ARHGAP21Q5T5U3 1957 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SVILO95425 2214 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 IGKV3D-15A0A087WSY6 115 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 M0R129 80 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 TRAF3IP2O43734 574 aaPredicted RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 CYTIPO60759 359 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SERPINI2O75830 405 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 GLCEO94923 617 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 AGFG2O95081 481 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SLC2A10O95528 541 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 CLDN1O95832 211 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 OPN1LWP04000 364 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 HOXD4P09016 255 aaPredicted RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 ATP6V1B1P15313 513 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SPI1P17947 270 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SLC2A5P22732 501 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SHC1P29353 583 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 PTGER4P35408 488 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 STARP49675 285 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 P2RY4P51582 365 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms