RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 EGR4Q05215 589 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 FAM74A3Q4VXF1 159 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 MCATQ8IVS2 390 aaKnown RBP11.9□□□□□ -0.5
SFXN3-205ENST00000470252 ZNF440Q8IYI8 595 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 GALNT16Q8N428 558 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 CLRN3Q8NCR9 226 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 OR1J2Q8NGS2 313 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 PHOSPHO1Q8TCT1 267 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 DNAJA3Q96EY1 480 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 DGAT2Q96PD7 388 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 NPAS1Q99742 590 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 TINAGL1Q9GZM7 467 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-205ENST00000470252 SLC6A15Q9H2J7 730 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 ELOVL3Q9HB03 270 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 FAM60AQ9NP50 221 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 FBXO4Q9UKT5 387 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 CACNA1IQ9P0X4 2223 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 OR5H14A6NHG9 310 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
SFXN3-205ENST00000470252 TXNDC12O95881 172 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 HLA-DQA2P01906 255 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 HOXC4P09017 264 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-205ENST00000470252 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 HPGDP15428 266 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 KIR2DL1P43626 348 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-205ENST00000470252 LUMP51884 338 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-205ENST00000470252 BTG2P78543 158 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 CD226Q15762 336 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 LRRC37A5PQ49AS3 106 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 KLHL26Q53HC5 615 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 SHEQ5VZ18 495 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 CBLN3Q6UW01 205 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 TMEM205Q6UW68 189 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 SLC35D2Q76EJ3 337 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 PM20D2Q8IYS1 436 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 BPIFCQ8NFQ6 507 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 LIPHQ8WWY8 451 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 KTI12Q96EK9 354 aaPredicted RBP11.9□□□□□ -0.5
SFXN3-205ENST00000470252 NARS2Q96I59 477 aaKnown RBP11.9□□□□□ -0.5
SFXN3-205ENST00000470252 BMFQ96LC9 184 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 FOXN4Q96NZ1 517 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 MNTQ99583 582 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 WDR13Q9H1Z4 485 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 OR10A5Q9H207 317 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 GDE1Q9NZC3 331 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 SLC22A13Q9Y226 551 aa11.9□□□□□ -0.5
SFXN3-205ENST00000470252 TDRD6O60522 2096 aaKnown RBP11.9□□□□□ -0.51
SFXN3-205ENST00000470252 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 ARID1BQ8NFD5 2236 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-205ENST00000470252 K7EQS6 105 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 FOSL1P15407 271 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 CFPP27918 469 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 CENPAP49450 140 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 TMEM196Q5HYL7 178 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 EEF1A1P5Q5VTE0 462 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 JMJD6Q6NYC1 403 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-205ENST00000470252 TMEM17Q86X19 198 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 PPP1R14AQ96A00 147 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 FAM131CQ96AQ9 280 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 SEH1LQ96EE3 360 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 SLC17A5Q9NRA2 495 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 CPNE7Q9UBL6 633 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 FARSAQ9Y285 508 aaKnown RBP11.89□□□□□ -0.51
SFXN3-205ENST00000470252 ALOX12BO75342 701 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 APBB3O95704 486 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 MELTFP08582 738 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 RNH1P13489 461 aaKnown RBP11.89□□□□□ -0.51
SFXN3-205ENST00000470252 RAB3AP20336 220 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 GDI1P31150 447 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 PBX2P40425 430 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 GPR3P46089 330 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 FGL1Q08830 312 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 NR0B2Q15466 257 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 TAF13Q15543 124 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 MEP1BQ16820 701 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 ALG11Q2TAA5 492 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 SCGB2B2Q4G0G5 96 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 BEX5Q5H9J7 111 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 EMC4Q5J8M3 183 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 CLVS2Q5SYC1 327 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 GLT8D1Q68CQ7 371 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 TMEM229BQ8NBD8 167 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 OR1J4Q8NGS1 313 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 OTOSQ8NHW6 89 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 ZNF75AQ96N20 296 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 VRK1Q99986 396 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-205ENST00000470252 SLC25A21Q9BQT8 299 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-205ENST00000470252 PTDSS2Q9BVG9 487 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 SFXN1Q9H9B4 322 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 BARX1Q9HBU1 254 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-205ENST00000470252 PRTFDC1Q9NRG1 225 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 EPHA6Q9UF33 1036 aa11.89□□□□□ -0.51
SFXN3-205ENST00000470252 GPN3Q9UHW5 284 aaPredicted RBP11.89□□□□□ -0.51
SFXN3-205ENST00000470252 LRP4O75096 1905 aa11.88□□□□□ -0.51
SFXN3-205ENST00000470252 PCP4L1A6NKN8 68 aa11.88□□□□□ -0.51
SFXN3-205ENST00000470252 CCSO14618 274 aa11.88□□□□□ -0.51
SFXN3-205ENST00000470252 PHYHO14832 338 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms