RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 SLC17A5Q9NRA2 495 aa7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 SERINC1Q9NRX5 453 aa7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 CA10Q9NS85 328 aa7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 PLCXD1Q9NUJ7 323 aa7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 DDX28Q9NUL7 540 aaKnown RBP7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 PARPBPQ9NWS1 579 aa7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 TAS2R7Q9NYW3 318 aa7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 WBP11Q9Y2W2 641 aaKnown RBP7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 LYVE1Q9Y5Y7 322 aa7.74□□□□□ -1.17
SYNGAP1-205ENST00000470232 VWFP04275 2813 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 IGKV3D-15A0A087WSY6 115 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 A0A1W2PNR3 127 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 CLDN24A6NM45 220 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 SULT2B1O00204 365 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 AIREO43918 545 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 KCNK2O95069 426 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 TFP02787 698 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 CDK1P06493 297 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 OR4A8P0C604 315 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 HKR1P10072 659 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 ARAFP10398 606 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 EDNRAP25101 427 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 EPHA2P29317 976 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 CD40LGP29965 261 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 GPC1P35052 558 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 SELENOWP63302 87 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 CDK6Q00534 326 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 TEKQ02763 1124 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 RIN1Q13671 783 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 PDE7AQ13946 482 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 OXA1LQ15070 435 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 TIGD6Q17RP2 521 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 COX20Q5RI15 118 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 FAM71E1Q6IPT2 247 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 C3orf33Q6P1S2 294 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 FAHD2BQ6P2I3 314 aaPredicted RBP7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 CCDC80Q76M96 950 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 BPIFB2Q8N4F0 458 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 NUP43Q8NFH3 380 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 OR51F2Q8NH61 342 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 MCFD2Q8NI22 146 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 GPR119Q8TDV5 335 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 GEMIN6Q8WXD5 167 aaKnown RBP7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 GGHQ92820 318 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 RPL3LQ92901 407 aaKnown RBP7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 UBE2FQ969M7 185 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 CIDECQ96AQ7 238 aaPredicted RBP7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 ITPKCQ96DU7 683 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 MTERF3Q96E29 417 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 FAHD2AQ96GK7 314 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 HRASLS5Q96KN8 279 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 AMDHD1Q96NU7 426 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 SIGLEC11Q96RL6 698 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 DCSTAMPQ9H295 470 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 GLIPR2Q9H4G4 154 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 TMEM38AQ9H6F2 299 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 ARMC7Q9H6L4 198 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 IMPAD1Q9NX62 359 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 MED29Q9NX70 200 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 GIN1Q9NXP7 522 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 NDUFAF4Q9P032 175 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 MALT1Q9UDY8 824 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 PSORS1C1Q9UIG5 152 aa7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 FAM32AQ9Y421 112 aaKnown RBP7.73□□□□□ -1.17
SYNGAP1-205ENST00000470232 TRAV20A0A0B4J274 112 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 TMEM247A6NEH6 219 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 METTL15A6NJ78 407 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 POM121CA8CG34 1229 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 C5orf58C9J3I9 102 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 M0R082 166 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 PNPP00491 289 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 MSMBP08118 114 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 DBTP11182 482 aaKnown RBP7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 UQCRC2P22695 453 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 GADD45AP24522 165 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 FPR2P25090 351 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 MAGEA8P43361 318 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 IDH2P48735 452 aaKnown RBP7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 PRKAG1P54619 331 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 DSTNP60981 165 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 TUBA1BP68363 451 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 HBA1P69905 142 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 ZNF117Q03924 483 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 TBCEQ15813 527 aaPredicted RBP7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 OCLNQ16625 522 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 MICAQ29983 383 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 SLC25A53Q5H9E4 307 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 ZCCHC12Q6PEW1 402 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 RBMS3Q6XE24 437 aaKnown RBP7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 TMPPEQ6ZT21 453 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 TUBA1AQ71U36 451 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 ZNF367Q7RTV3 350 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 TSEN54Q7Z6J9 526 aaKnown RBP7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 RNF130Q86XS8 419 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 ARMC8Q8IUR7 673 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 COX18Q8N8Q8 333 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 OR4F15Q8NGB8 312 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 OR52J3Q8NH60 311 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 OR5AK3PQ8NH89 298 aa7.72□□□□□ -1.17
SYNGAP1-205ENST00000470232 RHOXF1Q8NHV9 184 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms