RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 APOOLQ6UXV4 268 aa3.88□□□□□ -1.79
GCFC2-205ENST00000470197 MMAAQ8IVH4 418 aaKnown RBP3.88□□□□□ -1.79
GCFC2-205ENST00000470197 LINC00469Q8N7U9 141 aa3.88□□□□□ -1.79
GCFC2-205ENST00000470197 ZSCAN4Q8NAM6 433 aaPredicted RBP3.88□□□□□ -1.79
GCFC2-205ENST00000470197 MS4A4EQ96PG1 132 aa3.88□□□□□ -1.79
GCFC2-205ENST00000470197 C6orf106Q9H6K1 298 aaPredicted RBP3.88□□□□□ -1.79
GCFC2-205ENST00000470197 STAP1Q9ULZ2 295 aa3.88□□□□□ -1.79
GCFC2-205ENST00000470197 EIF3LQ9Y262 564 aaKnown RBP3.88□□□□□ -1.79
GCFC2-205ENST00000470197 SPTAN1Q13813 2472 aaKnown RBP3.88□□□□□ -1.79
GCFC2-205ENST00000470197 PHF3Q92576 2039 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 K7EQD1 137 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CETN3O15182 167 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 GMDSO60547 372 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 TBL1XO60907 577 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PDHA2P29803 388 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PSMD8P48556 350 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 TMED10P49755 219 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 ATP6V0D1P61421 351 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 YWHAEP62258 255 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 KCNJ2P63252 427 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 UNC93AQ86WB7 457 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PRIMA1Q86XR5 153 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CMTM1Q8IZ96 169 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 OR4C5Q8NGB2 326 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 OR1S2Q8NGQ3 325 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CAPSLQ8WWF8 208 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 FGF11Q92914 225 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 DNAJC19Q96DA6 116 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 TSNARE1Q96NA8 513 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CTSFQ9UBX1 484 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PPP1R3CQ9UQK1 317 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 BZW2Q9Y6E2 419 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 NAV2Q8IVL1 2488 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 ATG2AQ2TAZ0 1938 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 NSG1A0A0A6YYJ2 146 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PLSCR5A0PG75 271 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 APOEP02649 317 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 SYT1P21579 422 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CD38P28907 300 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CASP1P29466 404 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 IL2RGP31785 369 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 NSG1P42857 185 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 MS4A18Q3C1V0 323 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 SLC25A48Q6ZT89 311 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 ZNF557Q8N988 423 aaPredicted RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 TSG101Q99816 390 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 NIPSNAP3BQ9BS92 247 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CALN1Q9BXU9 219 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 FGFBP2Q9BYJ0 223 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 RNF167Q9H6Y7 350 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 AGPAT4Q9NRZ5 378 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 THUMPD1Q9NXG2 353 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 MYO18AQ92614 2054 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PI4KAP42356 2102 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 DMXL1Q9Y485 3027 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 IGHV2-70DA0A0C4DH43 119 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 A0A1W2PNV4 684 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 J3QKU1 62 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 SLC31A1O15431 190 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 OR10H3O60404 316 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 ENTPD5O75356 428 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 RHOXF2BP0C7M4 288 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 TRIM49P0CI25 452 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 TRIM49CP0CI26 452 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CCL2P13500 99 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 FGF9P31371 208 aaPredicted RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 OTX1P32242 354 aaPredicted RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 MAP3K8P41279 467 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CLDN6P56747 220 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 NANOS2P60321 138 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 YWHAGP61981 247 aaKnown RBP eCLIP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 SNRPFP62306 86 aaKnown RBP3.87□□□□□ -1.79
GCFC2-205ENST00000470197 LCN2P80188 198 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PXDC1Q5TGL8 231 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 HES3Q5TGS1 186 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PDPK2PQ6A1A2 396 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 FRRS1Q6ZNA5 592 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 PGAP1Q75T13 922 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 LRRC8AQ8IWT6 810 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 MICU2Q8IYU8 434 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 OR52B6Q8NGF0 335 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 NEIL2Q969S2 332 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 COL21A1Q96P44 957 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 RHOXF2Q9BQY4 288 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 ULBP1Q9BZM6 244 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 CUTCQ9NTM9 273 aa3.87□□□□□ -1.79
GCFC2-205ENST00000470197 AHCTF1Q8WYP5 2266 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 KPNA3O00505 521 aaPredicted RBP3.86□□□□□ -1.79
GCFC2-205ENST00000470197 TYROBPO43914 113 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 HSMCR30P0CW71 290 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 DAOP14920 347 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 CYBRD1Q53TN4 286 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 RFWD3Q6PCD5 774 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 SLC16A14Q7RTX9 510 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 MARVELD2Q8N4S9 558 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 HSD17B11Q8NBQ5 300 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 UBA3Q8TBC4 463 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 GABRG3Q99928 467 aa3.86□□□□□ -1.79
GCFC2-205ENST00000470197 FAIM2Q9BWQ8 316 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms