RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SLC18B1Q6NT16 456 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 OR8K3Q8NH51 312 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 NUDT9Q9BW91 350 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 OR8D2Q9GZM6 311 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 RAB33BQ9H082 229 aa12.31□□□□□ -0.44
BRCA1-209ENST00000470026 DNAH14Q0VDD8 3507 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 TMEM272A0A1B0GTI8 110 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 hCG_1807616A0A1W2PRN6 198 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 XKRYO14609 159 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 HCRTR2O43614 444 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 WNT11O96014 354 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 S100A11P31949 105 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 PRSS3P35030 304 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 GUCA2AQ02747 115 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 ELOCQ15369 112 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 ELAVL1Q15717 326 aaKnown RBP12.3□□□□□ -0.44
BRCA1-209ENST00000470026 ACKR1Q16570 336 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 RGS7BPQ6MZT1 257 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-209ENST00000470026 NAXDQ8IW45 347 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 TSEN15Q8WW01 171 aaKnown RBP12.3□□□□□ -0.44
BRCA1-209ENST00000470026 METTL21AQ8WXB1 218 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 TSLPQ969D9 159 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 MVB12AQ96EY5 273 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 TXNIPQ9H3M7 391 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 APMAPQ9HDC9 416 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 UNC80Q8N2C7 3258 aa12.3□□□□□ -0.44
BRCA1-209ENST00000470026 TRAV18A0A075B6X5 111 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 MFSD2BA6NFX1 497 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 DOK2O60496 412 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 SRSF10O75494 262 aaKnown RBP12.29□□□□□ -0.44
BRCA1-209ENST00000470026 WISP1O95388 367 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 ITGB2P05107 769 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 ACSM4P0C7M7 580 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 NME1P15531 152 aaKnown RBP12.29□□□□□ -0.44
BRCA1-209ENST00000470026 PGCP20142 388 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 CCKBRP32239 447 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 EFNA3P52797 238 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 TMEM225Q6GV28 225 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 CATSPERDQ86XM0 798 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 CDH26Q8IXH8 852 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 PRR22Q8IZ63 422 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 MUC20Q8N307 709 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-209ENST00000470026 OR5M1Q8NGP8 315 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 OR1J4Q8NGS1 313 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 ASB5Q8WWX0 329 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 CLIP3Q96DZ5 547 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 SLC38A3Q99624 504 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 CHRDQ9H2X0 955 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 MYOZ1Q9NP98 299 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-209ENST00000470026 CUTCQ9NTM9 273 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 SOHLH2Q9NX45 425 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 SLC22A13Q9Y226 551 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 LDLRAD4O15165 306 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 NMBP08949 121 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 GTF2F2P13984 249 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 MAOBP27338 520 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 ODF4Q2M2E3 257 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 YOD1Q5VVQ6 348 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-209ENST00000470026 OR7E24Q6IFN5 339 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 KRT77Q7Z794 578 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 MARCH3Q86UD3 253 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 C9orf40Q8IXQ3 194 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 OR51S1Q8NGJ8 323 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 MSANTD3Q96H12 275 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 CCDC120Q96HB5 630 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 TGM7Q96PF1 710 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 SPEF1Q9Y4P9 236 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 KCNMB2Q9Y691 235 aa12.29□□□□□ -0.44
BRCA1-209ENST00000470026 A0A1W2PPC1 479 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 SLC22A23A1A5C7 686 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 C17orf51A8MQB3 221 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 A8MUA0 341 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 C11orf98E9PRG8 122 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 F5H5P2 479 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ADAM10O14672 748 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 SCO1O75880 301 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 GABRA1P14867 456 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 GLULP15104 373 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 PPP3CBP16298 524 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 CTLA4P16410 223 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-209ENST00000470026 LTBRP36941 435 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 POLR2HP52434 150 aaKnown RBP12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ACTBP60709 375 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ACTG1P63261 375 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 MFGE8Q08431 387 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-209ENST00000470026 KCNAB1Q14722 419 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 STEAP1BQ6NZ63 245 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 KCTD18Q6PI47 426 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-209ENST00000470026 TMUB2Q71RG4 321 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 SLC35D2Q76EJ3 337 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 GKN2Q86XP6 184 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ZNF441Q8N8Z8 693 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 TMEM229BQ8NBD8 167 aa12.28□□□□□ -0.44
BRCA1-209ENST00000470026 SEH1LQ96EE3 360 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms