RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SCAND1P57086 179 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 OC90Q02509 493 aaPredicted RBP14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 WDR38Q5JTN6 314 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 OR5M1Q8NGP8 315 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 TCTN2Q96GX1 697 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 C4orf45Q96LM5 186 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 TRAV18A0A075B6X5 111 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 ARPC4-TTLL3A0A0A6YYG9 625 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 MEIS3P1A6NDR6 274 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 SUSD5O60279 629 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 PROS1P07225 676 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 SERTAD2Q14140 314 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 UBXN2BQ14CS0 331 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 C2orf68Q2NKX9 166 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 SFRP5Q5T4F7 317 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 PRR22Q8IZ63 422 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 MCHR2Q969V1 340 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 LINC00052Q96N35 136 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 FOXN4Q96NZ1 517 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 KCNK15Q9H427 330 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 TAS2R8Q9NYW2 309 aa14.27□□□□□ -0.13
TSPAN4-211ENST00000468468 C11orf98E9PRG8 122 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 HLA-DQA2P01906 255 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 CCKBRP32239 447 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 PPICP45877 212 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 POU3F4P49335 361 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 CENPAP49450 140 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 GPAT4Q86UL3 456 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 ATOH1Q92858 354 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 ADOQ96SZ5 270 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 ELOVL3Q9HB03 270 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 hCG_1807616A0A1W2PRN6 198 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 ARPC5O15511 151 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 RAD1O60671 282 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 KDM4BO94953 1096 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 ACSM4P0C7M7 580 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 GTF2F2P13984 249 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 POU3F2P20265 443 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 BLKP51451 505 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 SLC37A1P57057 533 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 UBE2MP61081 183 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 SEC61A1P61619 476 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 HLXQ14774 488 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 OTOSQ8NHW6 89 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 PTPMT1Q8WUK0 201 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 PNPLA2Q96AD5 504 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 PELOQ9BRX2 385 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 FOXQ1Q9C009 403 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 OR8D2Q9GZM6 311 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 GTF2A1LQ9UNN4 478 aa14.26□□□□□ -0.13
TSPAN4-211ENST00000468468 PHYHO14832 338 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 SNAPC5O75971 98 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 ITGA5P08648 1049 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 S100A11P31949 105 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 H2BFSP57053 126 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 C2orf76Q3KRA6 126 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 C1QL3Q5VWW1 255 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 NKAIN2Q5VXU1 208 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 SLC35D2Q76EJ3 337 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 BIVMQ86UB2 503 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 OR51S1Q8NGJ8 323 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 RTN4RQ9BZR6 473 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 ADAM19Q9H013 955 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 OPN4Q9UHM6 478 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 OR6C65A6NJZ3 312 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 ZNF35P13682 527 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 CXCR1P25024 350 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 CD1CP29017 333 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 GALNSP34059 522 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 MEP1BQ16820 701 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 COL13A1Q5TAT6 717 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 NKX3-1Q99801 234 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 SLC22A13Q9Y226 551 aa14.25□□□□□ -0.13
TSPAN4-211ENST00000468468 XKRYO14609 159 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 GOSR2O14653 212 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 ICOSLGO75144 302 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 PLGP00747 810 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 AKAIN1P0CW23 69 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 PRSS3P35030 304 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 ZNF117Q03924 483 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 RAB11BQ15907 218 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 TMUB2Q71RG4 321 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 MUC20Q8N307 709 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 OR2AK2Q8NG84 335 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 OR6N1Q8NGY5 312 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 OR8S1Q8NH09 359 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 LMX1AQ8TE12 382 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 FAM3DQ96BQ1 224 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 WBP1Q96G27 269 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 OR8B4Q96RC9 309 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 LAT2Q9GZY6 243 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 SAV1Q9H4B6 383 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 SOHLH2Q9NX45 425 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 PLCL2Q9UPR0 1127 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 FXYD6-FXYD2A0A087WZ82 144 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 HSPB2A8KAH6 182 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 C17orf51A8MQB3 221 aa14.24□□□□□ -0.13
TSPAN4-211ENST00000468468 HCRTR2O43614 444 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms