RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 PATE4P0C8F1 98 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 APLNRP35414 380 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 IFNGR2P38484 337 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 RAD52P43351 418 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 GPR4P46093 362 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 PCBD1P61457 104 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 SGCAQ16586 387 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 GPR139Q6DWJ6 353 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 SLC25A47Q6Q0C1 308 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 ALDH16A1Q8IZ83 802 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 SVOPLQ8N434 492 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 LRRC18Q8N456 261 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 ZNF525Q8N782 197 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 NSMAFQ92636 917 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 HTRA1Q92743 480 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 MRPL24Q96A35 216 aaKnown RBP12.62□□□□□ -0.39
COMMD3-206ENST00000468179 NMD3Q96D46 503 aaKnown RBP12.62□□□□□ -0.39
COMMD3-206ENST00000468179 WACQ9BTA9 647 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 MS4A5Q9H3V2 200 aa12.62□□□□□ -0.39
COMMD3-206ENST00000468179 FLNAP21333 2647 aaKnown RBP12.61□□□□□ -0.39
COMMD3-206ENST00000468179 IGHV4-30-2A0A087WSY4 118 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 LOC390937A0A1W2PQ73 354 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 ARPC2O15144 300 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 SYNGR3O43761 229 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 TLX2O43763 284 aaPredicted RBP12.61□□□□□ -0.39
COMMD3-206ENST00000468179 GADD45GO95257 159 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 SLC2A10O95528 541 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 SNAP29O95721 258 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 FABP3P05413 133 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 HOXB4P17483 251 aaPredicted RBP12.61□□□□□ -0.39
COMMD3-206ENST00000468179 ERVK-25P63136 954 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 VLDLRP98155 873 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 LOXL1Q08397 574 aaPredicted RBP12.61□□□□□ -0.39
COMMD3-206ENST00000468179 MOGQ16653 247 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 MTX3Q5HYI7 312 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 FAM27BQ5VT28 67 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 TSEN54Q7Z6J9 526 aaKnown RBP12.61□□□□□ -0.39
COMMD3-206ENST00000468179 IGFN1Q86VF2 1251 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 FGFBP3Q8TAT2 258 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 ZNF519Q8TB69 540 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 C10orf105Q8TEF2 133 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 FAM46AQ96IP4 442 aaKnown RBP12.61□□□□□ -0.39
COMMD3-206ENST00000468179 DHRS1Q96LJ7 313 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 SORCS2Q96PQ0 1159 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 TSPAN32Q96QS1 320 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 PIMREGQ9BSJ6 248 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 BCL2L14Q9BZR8 327 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 MUC13Q9H3R2 512 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 EIF3KQ9UBQ5 218 aaKnown RBP12.61□□□□□ -0.39
COMMD3-206ENST00000468179 TMCC3Q9ULS5 477 aa12.61□□□□□ -0.39
COMMD3-206ENST00000468179 MTORP42345 2549 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 SH3PXD2BA1X283 911 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 UNC119BA6NIH7 251 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 B2RBV5 119 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 M0R233 179 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 CDC42EP2O14613 210 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 CST2P09228 141 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 FUT4P22083 530 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 CALB2P22676 271 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 PCSK6P29122 969 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 CDAP32320 146 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 SPIBQ01892 262 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 FMODQ06828 376 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 FHL1Q13642 323 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 RGS7BPQ6MZT1 257 aaPredicted RBP12.6□□□□□ -0.39
COMMD3-206ENST00000468179 MEX3DQ86XN8 651 aaKnown RBP12.6□□□□□ -0.39
COMMD3-206ENST00000468179 ZNF584Q8IVC4 421 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 C1orf174Q8IYL3 243 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 FITM2Q8N6M3 262 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 OR52J3Q8NH60 311 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 C11orf40Q8WZ69 217 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 ZNF570Q96NI8 536 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 IL1RAPQ9NPH3 570 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 ACTR3BQ9P1U1 418 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 SIGLEC7Q9Y286 467 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 UGT2A1Q9Y4X1 527 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 TIMM10BQ9Y5J6 103 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 V9GYQ6 96 aa12.6□□□□□ -0.39
COMMD3-206ENST00000468179 C2CD3Q4AC94 2353 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 ALPK2Q86TB3 2170 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 TRBV4-1A0A0J9YWV2 114 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 TMEM129A0AVI4 362 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 C12orf71A8MTZ7 269 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 CD5LO43866 347 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 PTP4A3O75365 173 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 KRT36O76013 467 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 STAMBPO95630 424 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 SEMG1P04279 462 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 ADRA2AP08913 450 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 MMP7P09237 267 aaPredicted RBP12.59□□□□□ -0.39
COMMD3-206ENST00000468179 MSR1P21757 451 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 USF1P22415 310 aaPredicted RBP12.59□□□□□ -0.39
COMMD3-206ENST00000468179 SDHAP31040 664 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 MSX2P35548 267 aaPredicted RBP12.59□□□□□ -0.39
COMMD3-206ENST00000468179 OMPP47874 163 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 LIMS1P48059 325 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 RPS6KA3P51812 740 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 CARTPTQ16568 116 aa12.59□□□□□ -0.39
COMMD3-206ENST00000468179 PABPC1L2AQ5JQF8 200 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms