RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 VGLL3A8MV65 326 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 OR8G3PP0DMU2 310 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 GAAP10253 952 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 PSMB10P40306 273 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 SERPINB10P48595 397 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 ENTPD1P49961 510 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 TAS2R43P59537 309 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 PLXDC2Q6UX71 529 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 LRRC69Q6ZNQ3 347 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 SPACA3Q8IXA5 215 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 MCHR2Q969V1 340 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 OR2M2Q96R28 347 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 DCLRE1CQ96SD1 692 aaKnown RBP18.28■□□□□ 0.52
TMEM53-207ENST00000468117 MNTQ99583 582 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 ZDHHC11Q9H8X9 412 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 SSUH2Q9Y2M2 353 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 QDPRP09417 244 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 UGT2B10P36537 528 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 CAPZA2P47755 286 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 SELENOPP49908 381 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 GBX2P52951 348 aaPredicted RBP18.28■□□□□ 0.52
TMEM53-207ENST00000468117 SLC3A1Q07837 685 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 GPR50Q13585 617 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 INSL4Q14641 139 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 ABLIM2Q6H8Q1 611 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 C22orf42Q6IC83 251 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 GLB1L2Q8IW92 636 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 KBTBD8Q8NFY9 601 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 NEIL3Q8TAT5 605 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 HDHD5Q9BXW7 423 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 EXO5Q9H790 373 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 MRM2Q9UI43 246 aaKnown RBP18.28■□□□□ 0.52
TMEM53-207ENST00000468117 ST6GALNAC2Q9UJ37 374 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 FLVCR1Q9Y5Y0 555 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 CACNA1GO43497 2377 aa18.28■□□□□ 0.52
TMEM53-207ENST00000468117 PLPP2O43688 288 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 SIRPAP78324 504 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 C3AR1Q16581 482 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 LRFN4Q6PJG9 635 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 CD200R1LQ6Q8B3 271 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 FCRLAQ7L513 359 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 MEIOBQ8N635 442 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 ABHD3Q8WU67 409 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 IKZF2Q9UKS7 526 aa18.27■□□□□ 0.52
TMEM53-207ENST00000468117 IGF2RP11717 2491 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 TRGV5A0A0B4J1U4 118 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 A0A1W2PPL8 197 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 TFECO14948 347 aaPredicted RBP18.27■□□□□ 0.51
TMEM53-207ENST00000468117 ZNF432O94892 652 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 ZNF823P16415 610 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 ZNF24P17028 368 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 EIF2S3P41091 472 aaKnown RBP18.27■□□□□ 0.51
TMEM53-207ENST00000468117 SH3BGRP55822 239 aaPredicted RBP18.27■□□□□ 0.51
TMEM53-207ENST00000468117 PHYHD1Q5SRE7 291 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 DMKNQ6E0U4 476 aaPredicted RBP18.27■□□□□ 0.51
TMEM53-207ENST00000468117 SLC25A47Q6Q0C1 308 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 TMEM123Q8N131 208 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 ZADH2Q8N4Q0 377 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 OR6N1Q8NGY5 312 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 GLTPQ9NZD2 209 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 KLHL9Q9P2J3 617 aa18.27■□□□□ 0.51
TMEM53-207ENST00000468117 NCOA6Q14686 2063 aaPredicted RBP18.26■□□□□ 0.51
TMEM53-207ENST00000468117 RPP14O95059 124 aaKnown RBP18.26■□□□□ 0.51
TMEM53-207ENST00000468117 ACTL6AO96019 429 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 HLA-DPB1P04440 258 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 KRT8P05787 483 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 LAP3P28838 519 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 CDAP32320 146 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 NTF4P34130 210 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 CSNK1A1P48729 337 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 TUBA1BP68363 451 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 RASGEF1BQ0VAM2 473 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 SLC18B1Q6NT16 456 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 TUBA1AQ71U36 451 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 FAM220AQ7Z4H9 259 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 YIPF7Q8N8F6 280 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 HTRA1Q92743 480 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 PGLYRP3Q96LB9 341 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 DCBLD2Q96PD2 775 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 MYCBPQ99417 103 aaPredicted RBP18.26■□□□□ 0.51
TMEM53-207ENST00000468117 SEC61A2Q9H9S3 476 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 PMF1-BGLAPU3KQ54 211 aa18.26■□□□□ 0.51
TMEM53-207ENST00000468117 METTL15A6NJ78 407 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 CD8B2A6NJW9 211 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 PHYHO14832 338 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 CYTIPO60759 359 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 ABHD16AO95870 558 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 CD8BP10966 210 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 EGR3Q06889 387 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 EIF2B1Q14232 305 aaKnown RBP18.25■□□□□ 0.51
TMEM53-207ENST00000468117 CDK5R1Q15078 307 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 BCL2A1Q16548 175 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 DGUOKQ16854 277 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 LIPNQ5VXI9 398 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 KCTD20Q7Z5Y7 419 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 LINC00346Q8IVM7 164 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 FNDC8Q8TC99 324 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 C11orf40Q8WZ69 217 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 RNF166Q96A37 237 aaPredicted RBP18.25■□□□□ 0.51
TMEM53-207ENST00000468117 SLCO1C1Q9NYB5 712 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms