RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TEX12Q9BXU0 123 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 POLDIP3Q9BY77 421 aaKnown RBP13.08□□□□□ -0.31
DDX56-208ENST00000467318 PLA2G12AQ9BZM1 189 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 SP140LQ9H930 580 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 SNTNA6NMZ2 147 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 ZNF726A6NNF4 738 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 BHLHE40O14503 412 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 IMPA2O14732 288 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 LRRTM2O43300 516 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 NOS3P29474 1203 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 OPRM1P35372 400 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 KIR2DL2P43627 348 aaPredicted RBP13.08□□□□□ -0.32
DDX56-208ENST00000467318 CLDN17P56750 224 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 CLEC12AQ5QGZ9 265 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 NCCRP1Q6ZVX7 275 aaPredicted RBP13.08□□□□□ -0.32
DDX56-208ENST00000467318 FAM122BQ7Z309 247 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 LNX2Q8N448 690 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 CNEP1R1Q8N9A8 125 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 OR8D4Q8NGM9 314 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 OR9Q1Q8NGQ5 310 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 OR6X1Q8NH79 312 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 ZNF775Q96BV0 537 aaPredicted RBP13.08□□□□□ -0.32
DDX56-208ENST00000467318 MED29Q9NX70 200 aa13.08□□□□□ -0.32
DDX56-208ENST00000467318 CRNNQ9UBG3 495 aaPredicted RBP13.08□□□□□ -0.32
DDX56-208ENST00000467318 ZNF346Q9UL40 294 aaKnown RBP13.08□□□□□ -0.32
DDX56-208ENST00000467318 MYO7BQ6PIF6 2116 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 A0A0G2JNJ9 132 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 SLC35F4A4IF30 521 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 A6NIZ1 184 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 OR6C65A6NJZ3 312 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 CENPBD1B2RD01 187 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 TNFSF13O75888 250 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 ZNF432O94892 652 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 TXNDC12O95881 172 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 PTHP01270 115 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 IGFBP1P08833 259 aaPredicted RBP13.07□□□□□ -0.32
DDX56-208ENST00000467318 PSMD7P51665 324 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 SMSP52788 366 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 RAP1BP61224 184 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 RAP1AP62834 184 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 ERVK-25P63136 954 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 CDK5Q00535 292 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 FOXF2Q12947 444 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 PLEKHG7Q6ZR37 379 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 AAED1Q7RTV5 226 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 ARIH2OSQ8N7S6 290 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 NAXEQ8NCW5 288 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 SLC25A44Q96H78 314 aaPredicted RBP13.07□□□□□ -0.32
DDX56-208ENST00000467318 TXNDC15Q96J42 360 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 ERMAPQ96PL5 475 aaPredicted RBP13.07□□□□□ -0.32
DDX56-208ENST00000467318 MND1Q9BWT6 205 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 COQ3Q9NZJ6 369 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 Q9UFV3 132 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 ADAM18Q9Y3Q7 739 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 IER3IP1Q9Y5U9 82 aa13.07□□□□□ -0.32
DDX56-208ENST00000467318 LOC110117498-PIK3R3F6TDL0 507 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 XKRYO14609 159 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 PPP1R3DO95685 299 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 DBTP11182 482 aaKnown RBP13.06□□□□□ -0.32
DDX56-208ENST00000467318 NTF4P34130 210 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 BIDP55957 195 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 GINS1Q14691 196 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 MED22Q15528 200 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 KLHL22Q53GT1 634 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 ARMC4Q5T2S8 1044 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 FAM26EQ8N5C1 309 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 ASB10Q8WXI3 467 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 LRR1Q96L50 414 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 TSPAN32Q96QS1 320 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 EMC6Q9BV81 110 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 PRRG3Q9BZD7 231 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 PLSCR4Q9NRQ2 329 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 SLC5A6Q9Y289 635 aa13.06□□□□□ -0.32
DDX56-208ENST00000467318 A0A075B6Q4 140 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 LOC100506127A0A0U1RQW1 187 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 DVL2O14641 736 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 ENTPD6O75354 484 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 SLC43A1O75387 559 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 UPK1BO75841 260 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 IGHG1P01857 330 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 HMGN1P05114 100 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 SCG5P05408 212 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 HSMCR30P0CW71 290 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 CD8BP10966 210 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 NR2C1P13056 603 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 ACVR1BP36896 505 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 ETV6P41212 452 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 MELKQ14680 651 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 NIPAL3Q6P499 406 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 NUFIP2Q7Z417 695 aaKnown RBP13.05□□□□□ -0.32
DDX56-208ENST00000467318 ZNF100Q8IYN0 542 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 PROKR2Q8NFJ6 384 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 ZNF519Q8TB69 540 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 APH1AQ96BI3 265 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 STARD4Q96DR4 205 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 CCDC120Q96HB5 630 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 Q96M85 177 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 OR2M2Q96R28 347 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 PIGMQ9H3S5 423 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 ERRFI1Q9UJM3 462 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms