RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SLC47A1Q96FL8 570 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 SAMD8Q96LT4 415 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 NPAS1Q99742 590 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 GPA33Q99795 319 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 KATNB1Q9BVA0 655 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 RACGAP1Q9H0H5 632 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 C3orf14Q9HBI5 128 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 Q9N2J8 555 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 PPANQ9NQ55 473 aaKnown RBP4.66□□□□□ -1.66
PTCD3-207ENST00000467273 CA10Q9NS85 328 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 MED17Q9NVC6 651 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ASB6Q9NWX5 421 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ASIC5Q9NY37 505 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 NUDT4Q9NZJ9 180 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 SH3BP4Q9P0V3 963 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 OSGIN1Q9UJX0 560 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 ACOT9Q9Y305 439 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 PCNX3Q9H6A9 2034 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 RYR3Q15413 4870 aa4.66□□□□□ -1.66
PTCD3-207ENST00000467273 IGKV3D-15A0A087WSY6 115 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 DNAJC9-AS1A6NH13 148 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 CCT8L1PA6NM43 557 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF716A6NP11 495 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 CLIC1O00299 241 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 CTDSP2O14595 271 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 GPR171O14626 319 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 PIN1P1O15428 100 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 RAD51DO75771 328 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 CIB2O75838 187 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 OR2C1O95371 312 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 WISP3O95389 354 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-207ENST00000467273 NTN1O95631 604 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 OPN1LWP04000 364 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 GBAP04062 536 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 KLK1P06870 262 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF735P0CB33 412 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 THRBP10828 461 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 CLUP10909 449 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 DRD4P21917 467 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 MPIP34949 423 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 PCGF2P35227 344 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 SLC1A3P43003 542 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 KCNJ1P48048 391 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM33P57088 247 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 MRPS11P82912 194 aaKnown RBP4.65□□□□□ -1.67
PTCD3-207ENST00000467273 SPIBQ01892 262 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 TGFBR3Q03167 851 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 MFSD13AQ14CX5 517 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 GABRA6Q16445 453 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 SLC9B1Q4ZJI4 515 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 CFAP157Q5JU67 520 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 LIPMQ5VYY2 423 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 REP15Q6BDI9 236 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF813Q6ZN06 617 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 SPATA19Q7Z5L4 167 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 METTL4Q8N3J2 472 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 RNF175Q8N4F7 328 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 OR4F15Q8NGB8 312 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 OR4N2Q8NGD1 307 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 WDR20Q8TBZ3 569 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 ZFP90Q8TF47 636 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 SLAMF9Q96A28 289 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 SLC25A28Q96A46 364 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 FAM71F1Q96KD3 344 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-207ENST00000467273 ANKRD27Q96NW4 1050 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 BBS4Q96RK4 519 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 SLC6A7Q99884 636 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 KCNS3Q9BQ31 491 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 TPPP3Q9BW30 176 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 SRXN1Q9BYN0 137 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 RTN4RQ9BZR6 473 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 RHOJQ9H4E5 214 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF442Q9H7R0 627 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 PCDHB16Q9NRJ7 776 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 THAP1Q9NVV9 213 aa4.65□□□□□ -1.67
PTCD3-207ENST00000467273 STRAPQ9Y3F4 350 aaKnown RBP4.65□□□□□ -1.67
PTCD3-207ENST00000467273 LOC105371242A0A075B767 164 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 A0A1W2PQD3 144 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SYCE1LA8MT33 242 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 ATP6V1G2-DDX39BF2Z307 99 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 PDLIM1O00151 329 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 PRYO14603 147 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 MGST3O14880 152 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 CLN5O75503 358 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 UTS2O95399 124 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 PSMG1O95456 288 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 CLPTM1O96005 669 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 MT-ATP6P00846 226 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 CSTAP01040 98 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 CRYAAP02489 173 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 FGGP02679 453 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 KRT6BP04259 564 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 GLAP06280 429 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 OR4A8P0C604 315 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 LINGO3P0C6S8 592 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 PRPS2P11908 318 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 CD1DP15813 335 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 CDH2P19022 906 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-207ENST00000467273 ACHEP22303 614 aa4.64□□□□□ -1.67
PTCD3-207ENST00000467273 SFTPDP35247 375 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms