RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PCNX3Q9H6A9 2034 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 IGHV1-69DA0A0B4J2H0 117 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 OR7A17O14581 309 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 TM9SF1O15321 606 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 ENSAO43768 121 aaKnown RBP4.8□□□□□ -1.64
NCL-208ENST00000466274 URI1O94763 535 aaPredicted RBP4.8□□□□□ -1.64
NCL-208ENST00000466274 UBL3O95164 117 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 CSTAP01040 98 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 PTHP01270 115 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 IGHV1-69P01742 117 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 IGHV1-46P01743 117 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 IGHV3-13P01766 116 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 KRT6AP02538 564 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 KRT6BP04259 564 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 KRT16P08779 473 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 FBP1P09467 338 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 ANXA4P09525 319 aaPredicted RBP4.8□□□□□ -1.64
NCL-208ENST00000466274 RPS2P15880 293 aaKnown RBP4.8□□□□□ -1.64
NCL-208ENST00000466274 CCNA2P20248 432 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 TNFSF4P23510 183 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 ELK3P41970 407 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 KRT6CP48668 564 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 PIGFQ07326 219 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 RBBP4Q09028 425 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 ZKSCAN8Q15776 578 aaPredicted RBP4.8□□□□□ -1.64
NCL-208ENST00000466274 FAM83EQ2M2I3 478 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 CEACAM16Q2WEN9 425 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 ARHGAP11BQ3KRB8 267 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 MTX3Q5HYI7 312 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 METTL11BQ5VVY1 283 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 KLC3Q6P597 504 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 PGM2L1Q6PCE3 622 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 ADAMTSL5Q6ZMM2 481 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 C1orf122Q6ZSJ8 110 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 CREB3L2Q70SY1 520 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 CCDC91Q7Z6B0 441 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 COMTD1Q86VU5 262 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 OR8B3Q8NGG8 313 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 OR1J2Q8NGS2 313 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 CDC26Q8NHZ8 85 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 KIF18AQ8NI77 898 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 GRK7Q8WTQ7 553 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 NPRL2Q8WTW4 380 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 NSMAFQ92636 917 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 MAGOHBQ96A72 148 aaKnown RBP4.8□□□□□ -1.64
NCL-208ENST00000466274 ZNF524Q96C55 264 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 TSPAN32Q96QS1 320 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 OR8B2Q96RD0 313 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 TAPBPLQ9BX59 468 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 OR11A1Q9GZK7 315 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 PPA2Q9H2U2 334 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 C1orf198Q9H425 327 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 PIGUQ9H490 435 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 RNF121Q9H920 327 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 CDH20Q9HBT6 801 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 GPR35Q9HC97 309 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 FARSBQ9NSD9 589 aaKnown RBP4.8□□□□□ -1.64
NCL-208ENST00000466274 MKS1Q9NXB0 559 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 B3GNT2Q9NY97 397 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 SLC17A7Q9P2U7 560 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 RCE1Q9Y256 329 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 RASD1Q9Y272 281 aa4.8□□□□□ -1.64
NCL-208ENST00000466274 STAB2Q8WWQ8 2551 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 DNAH3Q8TD57 4116 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 A0A0U1RQK1 487 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 CENPVL3A0A0U1RRI6 287 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 CEACAM18A8MTB9 384 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 ZNF879B4DU55 563 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 IFNL4K9M1U5 179 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 FBP2O00757 339 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 RAMP3O60896 148 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 SCN2BO60939 215 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 PEX14O75381 377 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 PIAS1O75925 651 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 AKR7A3O95154 331 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 SERPINA5P05154 406 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 UBTFL6P0CB48 400 aaPredicted RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 ZNF43P17038 809 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 GTF2E2P29084 291 aaKnown RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 HOXD3P31249 432 aaPredicted RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 RPL4P36578 427 aaKnown RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 CFHR2P36980 270 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 POLR2HP52434 150 aaKnown RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 UCP2P55851 309 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 RAB1AP62820 205 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 SKP2Q13309 424 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 PMS2P3Q13401 168 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 CEACAM7Q14002 265 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 OR7A5Q15622 319 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 FAM153CQ494X1 144 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 DCST2Q5T1A1 773 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.79□□□□□ -1.64
NCL-208ENST00000466274 SLC27A4Q6P1M0 643 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 ZNF782Q6ZMW2 699 aaPredicted RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 ZNF813Q6ZN06 617 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 LINGO2Q7L985 606 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 ZNF551Q7Z340 670 aaPredicted RBP4.79□□□□□ -1.64
NCL-208ENST00000466274 KLBQ86Z14 1044 aa4.79□□□□□ -1.64
NCL-208ENST00000466274 ZNF283Q8N7M2 679 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms