RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 STOML3Q8TAV4 291 aa12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 GPX8Q8TED1 209 aa12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 PIK3IP1Q96FE7 263 aa12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 AMELYQ99218 206 aa12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 PARP12Q9H0J9 701 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 ACKR4Q9NPB9 350 aa12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 MBNL1Q9NR56 388 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 LAMP5Q9UJQ1 280 aa12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 SLC22A13Q9Y226 551 aa12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 CARHSP1Q9Y2V2 147 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-204ENST00000465892 A0A0A6YYC8 382 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 I3L1I5 382 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 GMFGO60234 142 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 PQBP1O60828 265 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 TACSTD2P09758 323 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 CSRP1P21291 193 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 CST5P28325 142 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 CDNFQ49AH0 187 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 C9orf152Q5JTZ5 239 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 ACER2Q5QJU3 275 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 ANKRD33Q7Z3H0 272 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 PRSS35Q8N3Z0 413 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 OR5T3Q8NGG3 340 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 OR2G2Q8NGZ5 317 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 RRNAD1Q96FB5 475 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 ZNF285Q96NJ3 590 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 C20orf24Q9BUV8 137 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 RHOFQ9HBH0 211 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 DPP7Q9UHL4 492 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 POM121BA6NF01 834 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 GLCEO94923 617 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 PRNPP04156 253 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 NQO2P16083 231 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 CPT2P23786 658 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 CD96P40200 585 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 ACAA2P42765 397 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 IRF4Q15306 451 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 KRBOX4Q5JUW0 171 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 EXOSC6Q5RKV6 272 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 ZNF684Q5T5D7 378 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 USP53Q70EK8 1073 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 VN1R4Q7Z5H5 301 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 MISPQ8IVT2 679 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 BAP18Q8IXM2 172 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 ADAD2Q8NCV1 583 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 TMEM52Q8NDY8 209 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 OR4K17Q8NGC6 315 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 RNF141Q8WVD5 230 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 WDR77Q9BQA1 342 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 NRIP2Q9BQI9 281 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 MRI1Q9BV20 369 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 ALX4Q9H161 411 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 KLF15Q9UIH9 416 aa12.62□□□□□ -0.39
TGFBR3-204ENST00000465892 OR4C45A6NMZ5 311 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 C1orf196B1AJZ1 125 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 C9JQL5 133 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 CDC40O60508 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 SRPX2O60687 465 aaPredicted RBP12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 SLC25A4P12235 298 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 CD80P33681 288 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 CENPAP49450 140 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 ACTBP60709 375 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 ACTG1P63261 375 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 ADAM8P78325 824 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 ECH1Q13011 328 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 RAB11BQ15907 218 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 VWA2Q5GFL6 755 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 GATSQ8NAP1 163 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 CMBLQ96DG6 245 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 COMMD4Q9H0A8 199 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 RNF186Q9NXI6 227 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 PCOLCE2Q9UKZ9 415 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 A0A1W2PPC1 479 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 C5orf52A6NGY3 159 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 MSGN1A6NI15 193 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 EFCAB7A8K855 629 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 FGF16O43320 207 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 FGF17O60258 216 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 LY86O95711 162 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 SERPINA5P05154 406 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 CD1AP06126 327 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 SMIM6P0DI80 62 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 TPT1P13693 172 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 RPS4Y1P22090 263 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 OR2B8PP59922 312 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 DPTQ07507 201 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 GLYATL3Q5SZD4 288 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 ACBD4Q8NC06 268 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 ZNF417Q8TAU3 575 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 GPR148Q8TDV2 347 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 FOXRED1Q96CU9 486 aaPredicted RBP12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 ZNF558Q96NG5 402 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 GAS2L1Q99501 681 aaPredicted RBP12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 LMAN2LQ9H0V9 348 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 RPS10P5Q9NQ39 176 aa12.61□□□□□ -0.39
TGFBR3-204ENST00000465892 DZANK1Q9NVP4 752 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms