RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 OR10A4Q9H209 315 aa16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 IGKV1D-43A0A0B4J1Z2 117 aa16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 A0A1W2PQM1 296 aa16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 RASGEF1BQ0VAM2 473 aa16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 FAM69BQ5VUD6 431 aa16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 TMEM71Q6P5X7 295 aa16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 OR56B4Q8NH76 319 aa16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 TRAF4Q9BUZ4 470 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 TGIF2Q9GZN2 237 aa16.8■□□□□ 0.28
TSPAN4-210ENST00000464987 WDFY4Q6ZS81 3184 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 A0A1B0GTQ1 180 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 GPR171O14626 319 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 PHYHO14832 338 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 HEXBP07686 556 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 ITGA5P08648 1049 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 RAB40ALP0C0E4 278 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 VEGFCP49767 419 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 EIF2B1Q14232 305 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 OR7A5Q15622 319 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 YOD1Q5VVQ6 348 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 GRPEL2Q8TAA5 225 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 RNF128Q8TEB7 428 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 RAB40AQ8WXH6 277 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 ABHD6Q9BV23 337 aa16.79■□□□□ 0.28
TSPAN4-210ENST00000464987 CENPBD1B2RD01 187 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 ERVH48-1M5A8F1 160 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 RAF1P04049 648 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 HTR2BP41595 481 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 CXCL12P48061 93 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 SLC26A5P58743 744 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 ZP1P60852 638 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 NKAIN1Q4KMZ8 207 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 TEX30Q5JUR7 227 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 WDR45BQ5MNZ6 344 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 LCN10Q6JVE6 187 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 SLC18B1Q6NT16 456 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 KRT77Q7Z794 578 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 STK35Q8TDR2 534 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 SNAPC3Q92966 411 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 SHDQ96IW2 340 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 MRPL39Q9NYK5 338 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 STEAP1Q9UHE8 339 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 SLC23A1Q9UHI7 598 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 FBXL3Q9UKT7 428 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 MGAT4AQ9UM21 535 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 LRP12Q9Y561 859 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 IGLV3-12A0A075B6K2 115 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 LY6G6EA0A0G2JKS1 128 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 ANKRD20A5PA0PJZ0 165 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 TSC22D2O75157 780 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 ZNF432O94892 652 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 IGHMP01871 453 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 ANXA3P12429 323 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 LYPD8Q6UX82 237 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 Q6ZTK2 550 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 NXPE2Q96DL1 559 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 WDR77Q9BQA1 342 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 EMC7Q9NPA0 242 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 MED29Q9NX70 200 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 SRPK3Q9UPE1 567 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 U3KQA8 63 aa16.78■□□□□ 0.28
TSPAN4-210ENST00000464987 TRBV11-1A0A0K0K1C0 115 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 H3BML4 177 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 IFNGR1P15260 489 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 PSMB1P20618 241 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 PUDPQ08623 228 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 C19orf57Q0VDD7 668 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 LINC00303Q3SY05 128 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 FDX2Q6P4F2 183 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 PAPD4Q6PIY7 484 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 NDUFAF7Q7L592 441 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 LINC00346Q8IVM7 164 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 PLPP7Q8NBV4 271 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 AKIRIN1Q9H9L7 192 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 APMAPQ9HDC9 416 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 STMN3Q9NZ72 180 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 ETV7Q9Y603 341 aa16.77■□□□□ 0.28
TSPAN4-210ENST00000464987 ANKUB1A6NFN9 424 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 ARPC1BO15143 372 aaKnown RBP16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 SULT1B1O43704 296 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 SSNA1O43805 119 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 OR2T1O43869 369 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 ALOX12BO75342 701 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 PEX14O75381 377 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 SCRG1O75711 98 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 GLSO94925 669 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 KDM4BO94953 1096 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 ECDO95905 644 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 SULT1A3P0DMM9 295 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 SULT1A4P0DMN0 295 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 RAG2P55895 527 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 CCL7P80098 99 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 FOXF1Q12946 379 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 INPP5JQ15735 1006 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 ZNF227Q86WZ6 799 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 IQCF2Q8IXL9 164 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 HGDQ93099 445 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 HLA-CQ95604 372 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 MRI1Q9BV20 369 aa16.77■□□□□ 0.27
TSPAN4-210ENST00000464987 HSPB2A8KAH6 182 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms