RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 CCL2P13500 99 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 APLNRP35414 380 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 SELENOWP63302 87 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 MYBPC1Q00872 1141 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 LAPTM4AQ15012 233 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 LRRC23Q53EV4 343 aaPredicted RBP12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 LIPNQ5VXI9 398 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 RFLNBQ8N5W9 214 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 MOSPD2Q8NHP6 518 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 FNDC8Q8TC99 324 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 BPIFA2Q96DR5 249 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 PRRC1Q96M27 445 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 ALG12Q9BV10 488 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 ZNF275Q9NSD4 429 aaPredicted RBP12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 UGT2A1Q9Y4X1 527 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 ELOVL7A1L3X0 281 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 NCR1O76036 304 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 CLPTM1O96005 669 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 SAGP10523 405 aaPredicted RBP12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 HSF2Q03933 536 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 CCNIQ14094 377 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 ANKDD1AQ495B1 522 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 ALG10Q5BKT4 473 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 PABPC1L2AQ5JQF8 200 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 THEM4Q5T1C6 240 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 FAM27BQ5VT28 67 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 FAM205BPQ63HN1 556 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 CGB2Q6NT52 195 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 TMEM154Q6P9G4 183 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 UNQ6126/PRO20091Q6UXV3 157 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 ARPINQ7Z6K5 226 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 GLCCI1Q86VQ1 547 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 C1orf174Q8IYL3 243 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 MICU2Q8IYU8 434 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 LRRC18Q8N456 261 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 CPEB3Q8NE35 698 aaKnown RBP12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 CLDND2Q8NHS1 167 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 SNX33Q8WV41 574 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 LZICQ8WZA0 190 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 YIPF5Q969M3 257 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 NABP1Q96AH0 204 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 RBP7Q96R05 134 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 C19orf24Q9BVV8 132 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 CCNB1IP1Q9NPC3 277 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 CAPN7Q9Y6W3 813 aa12.28□□□□□ -0.44
SNRNP40-203ENST00000463988 PPIHO43447 177 aaKnown RBP12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 SLC2A10O95528 541 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 IGHV3-13P01766 116 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 IGHMP01871 453 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 MT-ND5P03915 603 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 IFI30P13284 250 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 STOMP27105 288 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 SRP14P37108 136 aaKnown RBP12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 RPL27P61353 136 aaKnown RBP12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 TEKQ02763 1124 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 CD47Q08722 323 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 SLC25A47Q6Q0C1 308 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 OFCC1Q8IZS5 231 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 TPD52L3Q96J77 140 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 POM121L2Q96KW2 1035 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 CCDC134Q9H6E4 229 aa12.27□□□□□ -0.45
SNRNP40-203ENST00000463988 A6NIZ1 184 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 ICMTO60725 284 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 IFNW1P05000 195 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 MSMBP08118 114 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF32P17041 273 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 CDAP32320 146 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 CRYBB2P43320 205 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 MAGEB1P43366 347 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 RAP1BP61224 184 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 ERVS71-1P61550 626 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 LMO4P61968 165 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 RAP1AP62834 184 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 FMODQ06828 376 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 SGCAQ16586 387 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 ZNF718Q3SXZ3 478 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 FAM209AQ5JX71 171 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 FOXL2NBQ6ZUU3 175 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 RNF113BQ8IZP6 322 aaKnown RBP12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 LRRC75AQ8NAA5 344 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 FAM156AQ8NDB6 213 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 OR1J1Q8NGS3 322 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 RP9Q8TA86 221 aaKnown RBP12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 TMEM186Q96B77 213 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 TSPAN32Q96QS1 320 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 OR51B6Q9H340 312 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 CMTM6Q9NX76 183 aa12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 EIF3KQ9UBQ5 218 aaKnown RBP12.26□□□□□ -0.45
SNRNP40-203ENST00000463988 LOC100509620A0A075B734 347 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 IGKV1D-43A0A0B4J1Z2 117 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 FAM157AC9JC47 383 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 H3BSA7 217 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 TCF21O43680 179 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 PIP5K1CO60331 668 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 CST2P09228 141 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 GAAP10253 952 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 ANPEPP15144 967 aa12.25□□□□□ -0.45
SNRNP40-203ENST00000463988 DRD4P21917 467 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms