RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ARMC4Q5T2S8 1044 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 ANKRD16Q6P6B7 361 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 LRFN4Q6PJG9 635 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 MBOAT2Q6ZWT7 520 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF627Q7L945 461 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 TRPM8Q7Z2W7 1104 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZCCHC24Q8N2G6 241 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 GPR137CQ8N3F9 429 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 RFLNBQ8N5W9 214 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 NOXO1Q8NFA2 376 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 NUP37Q8NFH4 326 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 SEMA6DQ8NFY4 1073 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR13C2Q8NGS9 318 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 BCAS4Q8TDM0 211 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 NMD3Q96D46 503 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 BPIFA2Q96DR5 249 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 PYURFQ96I23 114 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 NSMCE2Q96MF7 247 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF75AQ96N20 296 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF347Q96SE7 839 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 VRK1Q99986 396 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 FNDC11Q9BVV2 318 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 MRPL13Q9BYD1 178 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 NDE1Q9NXR1 346 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 TAS2R1Q9NYW7 299 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 ACTR3BQ9P1U1 418 aa6.83□□□□□ -1.32
CDC42BPA-210ENST00000462553 IGKV1D-43A0A0B4J1Z2 117 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 TCF21O43680 179 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 TRMUO75648 421 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR6A2O95222 327 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 CRYAAP02489 173 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 HIST1H2ABP04908 130 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 H1F0P07305 194 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 DAOP14920 347 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 B4GALT1P15291 398 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 IFNA8P32881 189 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 THBS4P35443 961 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 MAGEA2P43356 314 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 OMPP47874 163 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 MNAT1P51948 309 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 CDH15P55291 814 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 FXYD6P3P58550 94 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 MS4A2Q01362 244 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 MSMPQ1L6U9 139 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 LCN8Q6JVE9 175 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 VHLLQ6RSH7 139 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 CYP2R1Q6VVX0 501 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF730Q6ZMV8 503 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 TMPRSS11FQ6ZWK6 438 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 HIST3H2AQ7L7L0 130 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 MDP1Q86V88 176 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 IGFN1Q86VF2 1251 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 CYP4Z1Q86W10 505 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 CDK20Q8IZL9 346 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 RNF113BQ8IZP6 322 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 ARHGAP24Q8N264 748 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 SVOPLQ8N434 492 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 FAM169BQ8N8A8 192 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 FGFBP3Q8TAT2 258 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF519Q8TB69 540 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 HDAC2Q92769 488 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 HIST1H2ACQ93077 130 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF566Q969W8 418 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 SLC7A6OSQ96CW6 309 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 SLC25A44Q96H78 314 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 FAM46AQ96IP4 442 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 CLPTM1LQ96KA5 538 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 SNX18Q96RF0 628 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 DOK1Q99704 481 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 GPA33Q99795 319 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 FOXB1Q99853 325 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 ULBP2Q9BZM5 246 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 C1orf21Q9H246 121 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 TXNIPQ9H3M7 391 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF442Q9H7R0 627 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 IL1RAPQ9NPH3 570 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 INIPQ9NRY2 104 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 B3GNT2Q9NY97 397 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 GLTPQ9NZD2 209 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 PRPF19Q9UMS4 504 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 NOTCH1P46531 2555 aa6.82□□□□□ -1.32
CDC42BPA-210ENST00000462553 IGHV2OR16-5A0A0B4J2B6 119 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 SH3PXD2BA1X283 911 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 HTR3EA5X5Y0 456 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF726A6NNF4 738 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 EFCAB9A8MZ26 197 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 CENPBD1B2RD01 187 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 MCIDASD6RGH6 385 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 LYNX1G3V0Z9 82 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 DHHO43323 396 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 GMNNO75496 209 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 SLC2A10O95528 541 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 BCL10O95999 233 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 IGHG1P01857 330 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 HLA-HP01893 362 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 LYNX1P0DP58 116 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 SAGP10523 405 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 ACADSP16219 412 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms