RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RDH5Q92781 318 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF799Q96GE5 643 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 SLC29A1Q99808 456 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 GABARAPL3Q9BY60 117 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 SLC25A39Q9BZJ4 359 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 IQCGQ9H095 443 aaKnown RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 OR51M1Q9H341 326 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 CWH43Q9H720 699 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 UGT1A7Q9HAW7 530 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 UGT1A10Q9HAW8 530 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 UGT1A8Q9HAW9 530 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 CENPJQ9HC77 1338 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 DMAP1Q9NPF5 467 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 ISYNA1Q9NPH2 558 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 RABL2AQ9UBK7 228 aaPredicted RBP2.04□□□□□ -2.08
HDAC6-212ENST00000461608 CLN8Q9UBY8 286 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 CD84Q9UIB8 345 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 KIAA1257Q9ULG3 409 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 TRAPPC4Q9Y296 219 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 HEBP2Q9Y5Z4 205 aa2.04□□□□□ -2.08
HDAC6-212ENST00000461608 CROCCQ5TZA2 2017 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CNTNAP1P78357 1384 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CARMIL3Q8ND23 1372 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 ASTN1O14525 1302 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 IGLV11-55A0A075B6I3 123 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 TRBV6-6A0A0A6YYG2 114 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 IGKV1D-13A0A0B4J2D9 117 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 A0A0G2JLM5 398 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 KIR2DL5BA0A0G2JN68 375 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 KIR2DL5BA0A0G2JPC4 375 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 A6NDX4 124 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 FAM166BA8MTA8 275 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 F6UB75 175 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 SCAMP2O15127 329 aaKnown RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 DFNA5O60443 496 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CA11O75493 328 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 TNFSF13O75888 250 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 AIFM1O95831 613 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 ASGR1P07306 291 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 ERCC1P07992 297 aaPredicted RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 IGKV1-13P0DP09 117 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 WARSP23381 471 aaKnown RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 DCKP27707 260 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 NMUP48645 174 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CYB561P49447 251 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 UBE2AP49459 152 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 HERVK_113P61574 105 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 NUTF2P61970 127 aaKnown RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 MAB21L1Q13394 359 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 UNC119Q13432 240 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 PSG5Q15238 335 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 GUCA2BQ16661 112 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 TMEM183BQ1AE95 376 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 PPM1LQ5SGD2 360 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CCNJQ5T5M9 372 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 UBE2UQ5VVX9 321 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 ANKRD22Q5VYY1 191 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 SPESP1Q6UW49 350 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF621Q6ZSS3 439 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 STRADAQ7RTN6 431 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 HDDC2Q7Z4H3 204 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CMC1Q7Z7K0 106 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 THOC6Q86W42 341 aaKnown RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 TMEM183AQ8IXX5 376 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 MICU2Q8IYU8 434 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 KIR2DL5AQ8N109 375 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 Q8N9W7 124 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 TTC29Q8NA56 475 aaPredicted RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 MDS2Q8NDY4 140 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 KIR2DL5BQ8NHK3 375 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 STARD8Q92502 1023 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 NRGNQ92686 78 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CREB3L1Q96BA8 519 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 FAM3DQ96BQ1 224 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CEP170P1Q96L14 293 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 JSRP1Q96MG2 331 aaPredicted RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 SERPINB12Q96P63 405 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 PANX1Q96RD7 426 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 DNTTIP1Q9H147 329 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 RPF2Q9H7B2 306 aaKnown RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 MRPL22Q9NWU5 206 aaKnown RBP2.03□□□□□ -2.08
HDAC6-212ENST00000461608 OR12D3Q9UGF7 316 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 CACNG2Q9Y698 323 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 ZNF318Q5VUA4 2279 aa2.03□□□□□ -2.08
HDAC6-212ENST00000461608 GTF3C1Q12789 2109 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 NFASCO94856 1347 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 KCNE1BA0A087WTH5 132 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 IGHV3-66A0A0C4DH42 116 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 ZNF816-ZNF321PA0A0X1KG74 233 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 SERTM2A0A1B0GWG4 89 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 A6NDN8 102 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 L7N2F9 121 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 EIF4E2O60573 245 aaKnown RBP2.02□□□□□ -2.09
HDAC6-212ENST00000461608 ICOSLGO75144 302 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 FKBP6O75344 327 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 SUPT3HO75486 399 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 CTAG2O75638 210 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 CLIC3O95833 236 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 SLC25A27O95847 323 aa2.02□□□□□ -2.09
HDAC6-212ENST00000461608 OR8G3PP0DMU2 310 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms