RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TMEM45BQ96B21 275 aa9.83□□□□□ -0.84
APTX-209ENST00000460940 DMRTB1Q96MA1 342 aa9.83□□□□□ -0.84
APTX-209ENST00000460940 ZNF587Q96SQ5 575 aaPredicted RBP9.83□□□□□ -0.84
APTX-209ENST00000460940 OPN3Q9H1Y3 402 aaPredicted RBP9.83□□□□□ -0.84
APTX-209ENST00000460940 MAGIXQ9H6Y5 334 aa9.83□□□□□ -0.84
APTX-209ENST00000460940 PARPBPQ9NWS1 579 aa9.83□□□□□ -0.84
APTX-209ENST00000460940 MED31Q9Y3C7 131 aa9.83□□□□□ -0.84
APTX-209ENST00000460940 FLVCR1Q9Y5Y0 555 aa9.83□□□□□ -0.84
APTX-209ENST00000460940 CENPEQ02224 2701 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 ARPC4-TTLL3A0A0A6YYG9 625 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 LOC100130705A0A1B0GUX0 176 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 LOC102725191A0A1B0GVB3 256 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 A0A1W2PRQ8 180 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 G3V2T6 193 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 FFAR1O14842 300 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 MT-ND1P03886 318 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 COX6B1P14854 86 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 PSMB9P28065 219 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 CD79BP40259 229 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 SLC15A1P46059 708 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 VLDLRP98155 873 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 RIPPLY1Q0D2K3 151 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 DGCR6Q14129 220 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 TOR2AQ5JU69 321 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 NXNL2Q5VZ03 156 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 ZNF474Q6S9Z5 364 aaPredicted RBP9.82□□□□□ -0.84
APTX-209ENST00000460940 NUFIP2Q7Z417 695 aaKnown RBP9.82□□□□□ -0.84
APTX-209ENST00000460940 NKAIN4Q8IVV8 208 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 ZNF610Q8N9Z0 462 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 TMEM255BQ8WV15 326 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 SNAPC3Q92966 411 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 PIP5K1AQ99755 562 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 C12orf49Q9H741 205 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 IL1RAPQ9NPH3 570 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 MAN2C1Q9NTJ4 1040 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 SCN3BQ9NY72 215 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 ERVK-18Q9QC07 812 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 DNAJB9Q9UBS3 223 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 V9GYQ6 96 aa9.82□□□□□ -0.84
APTX-209ENST00000460940 LINC00862A6NCI5 91 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 J3KTA2 159 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 OR7A10O76100 309 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 FABP3P05413 133 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 H1F0P07305 194 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 POU2F1P14859 743 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 CD36P16671 472 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 PRKACAP17612 351 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 PTNP21246 168 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 SMIM11AP58511 58 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 LTBQ06643 244 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 FAM98BQ52LJ0 330 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 SP5Q6BEB4 398 aaPredicted RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 MEX3BQ6ZN04 569 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 TSEN54Q7Z6J9 526 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 CCDC190Q86UF4 302 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 GPAT4Q86UL3 456 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 LSRQ86X29 649 aaPredicted RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 DMRTC2Q8IXT2 367 aaPredicted RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 ZNF100Q8IYN0 542 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 RNF113BQ8IZP6 322 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 OR10Z1Q8NGY1 313 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 OR5J2Q8NH18 312 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 ACOT11Q8WXI4 607 aaPredicted RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 RPL3LQ92901 407 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 APH1AQ96BI3 265 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 SGTBQ96EQ0 304 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 OXGR1Q96P68 337 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 MOGAT1Q96PD6 335 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 NMNAT1Q9HAN9 279 aaPredicted RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 ACOT13Q9NPJ3 140 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 MEPEQ9NQ76 525 aaPredicted RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 NANSQ9NR45 359 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.81□□□□□ -0.84
APTX-209ENST00000460940 RCE1Q9Y256 329 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 LYVE1Q9Y5Y7 322 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 SETXQ7Z333 2677 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 MEIOCA2RUB1 952 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 OR6C65A6NJZ3 312 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 PTGES3LE9PB15 166 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 NDUFA2O43678 99 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 AKAP8O43823 692 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 MRPL33O75394 65 aaKnown RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 CH25HO95992 272 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 HIST1H2ABP04908 130 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 MAGEA2P43356 314 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 MAP2K4P45985 399 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 PUDPQ08623 228 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 BAMBIQ13145 260 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 P2RY6Q15077 328 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 IQCCQ4KMZ1 466 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 CASP12Q6UXS9 341 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 Q6ZT83 130 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 HIST3H2AQ7L7L0 130 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 SLC46A3Q7Z3Q1 461 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 PFN4Q8NHR9 129 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 IPCEF1Q8WWN9 437 aaPredicted RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 LIPHQ8WWY8 451 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 HIST1H2ACQ93077 130 aa9.81□□□□□ -0.84
APTX-209ENST00000460940 C6orf62Q9GZU0 229 aaPredicted RBP9.81□□□□□ -0.84
APTX-209ENST00000460940 OR10A4Q9H209 315 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms