RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 RIPPLY2Q5TAB7 128 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 GPR107Q5VW38 600 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 TMEM198Q66K66 360 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 OR4C11Q6IEV9 310 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC27A4Q6P1M0 643 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF773Q6PK81 442 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF813Q6ZN06 617 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 RTL4Q6ZR62 310 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 COMMD6Q7Z4G1 85 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 RAB43Q86YS6 212 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 EPHX4Q8IUS5 362 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF619Q8N2I2 560 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 OR56B2PQ8NGI1 322 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 PSMA8Q8TAA3 256 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 OSR1Q8TAX0 266 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ST7LQ8TDW4 575 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM216AQ8WUB2 273 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 TWIST2Q8WVJ9 160 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 MTERF3Q96E29 417 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ZHX1-C8orf76Q96EF9 292 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ELMOD3Q96FG2 381 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 CMTM7Q96FZ5 175 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ZC3HAV1LQ96H79 300 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 OR52B2Q96RD2 323 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 PIMREGQ9BSJ6 248 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 PDCD10Q9BUL8 212 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC25A23Q9BV35 468 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 NLNQ9BYT8 704 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 VN1R1Q9GZP7 353 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 METTL9Q9H1A3 318 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 MMP27Q9H306 513 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 PLK3Q9H4B4 646 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 RANBP3Q9H6Z4 567 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 GORASP2Q9H8Y8 452 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ANKRA2Q9H9E1 313 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 SPACA1Q9HBV2 294 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ZBTB20Q9HC78 741 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 KIF25Q9UIL4 384 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 C3orf18Q9UK00 162 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 UTS2RQ9UKP6 389 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 ELF5Q9UKW6 265 aaPredicted RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 EXO1Q9UQ84 846 aaKnown RBP4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 POMPQ9Y244 141 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 HS3ST3B1Q9Y662 390 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC22A7Q9Y694 548 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 OTOGQ6ZRI0 2925 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 DNHD1Q96M86 4753 aa4.32□□□□□ -1.72
ATPAF1-203ENST00000460928 IGLV3-12A0A075B6K2 115 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 hCG_1809904A0A1W2PP81 198 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 A0A1W2PPE2 198 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 A0A1W2PR64 198 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CCDC182A6NF36 153 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 H7C2Y5 167 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RHODO00212 210 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SDHDO14521 159 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF195O14628 629 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ADAMDEC1O15204 470 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RGS5O15539 181 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SGCEO43556 437 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 PCDH7O60245 1069 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 FGF17O60258 216 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 UGDHO60701 494 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 MRPS14O60783 128 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SNNO75324 88 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SEC22BO75396 215 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 STX11O75558 287 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 GABARAPO95166 117 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RAB3DO95716 219 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 IFNA7P01567 189 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 FHP07954 510 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 IL3P08700 152 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 COX5BP10606 129 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 UROSP10746 265 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CBR1P16152 277 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 SRD5A1P18405 259 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CPN2P22792 545 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ELAVL4P26378 380 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 PTBP1P26599 531 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 GIFP27352 417 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 FEN1P39748 380 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ETV6P41212 452 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 KIR3DL2P43630 455 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 GPR12P47775 334 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CCL11P51671 97 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RAD23AP54725 363 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 DIO3P55073 304 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 CD81P60033 236 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 STXBP1P61764 594 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RPS15P62841 145 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ERVK-8P63133 956 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 RPL38P63173 70 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 IFITM3Q01628 133 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 PRKCDQ05655 676 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 FGL1Q08830 312 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM53BQ14153 422 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 PTGR1Q14914 329 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 TRAM2Q15035 370 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 ETFDHQ16134 617 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 NDUFA9Q16795 377 aa4.31□□□□□ -1.72
ATPAF1-203ENST00000460928 IMPG1Q17R60 797 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms