RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NHLH2Q02577 135 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 ZNF117Q03924 483 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 EXT1Q16394 746 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 COL28A1Q2UY09 1125 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 GFOD2Q3B7J2 385 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 BROXQ5VW32 411 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 RASSF6Q6ZTQ3 369 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 IQCF1Q8N6M8 205 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 OR11G2Q8NGC1 345 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 ZNF563Q8TA94 476 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 GLYATL2Q8WU03 294 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 BPIFA2Q96DR5 249 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 MRGPRX4Q96LA9 322 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 PLA2G12AQ9BZM1 189 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 C20orf141Q9NUB4 165 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 TPRKBQ9Y3C4 175 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 SDK2Q58EX2 2172 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 SPAARA0A1B0GVQ0 90 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 CDC42EP2O14613 210 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 OIP5O43482 229 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 MPZL2O60487 215 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 ZNF354AO60765 605 aaPredicted RBP9.39□□□□□ -0.91
HERC4-207ENST00000460168 FAM20BO75063 409 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 WBP4O75554 376 aaKnown RBP9.39□□□□□ -0.91
HERC4-207ENST00000460168 TNFSF15O95150 251 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 TPOP07202 933 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 FTH1P19P0C7X4 201 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 ITPKBP27987 946 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 APOBEC3AP31941 199 aaPredicted RBP9.39□□□□□ -0.91
HERC4-207ENST00000460168 OTX2P32243 289 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 GIPRP48546 466 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 SMSP52788 366 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 GABARAPL2P60520 117 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 TNFRSF9Q07011 255 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 MADCAM1Q13477 382 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 GINS1Q14691 196 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 NEDD8Q15843 81 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 CTF1Q16619 201 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 CLEC12AQ5QGZ9 265 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 PLAG1Q6DJT9 500 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 WBP2NLQ6ICG8 309 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 KLBQ86Z14 1044 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 SPAG16Q8N0X2 631 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 GDPD1Q8N9F7 314 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 PRR7Q8TB68 274 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 TRMT10AQ8TBZ6 339 aaKnown RBP9.39□□□□□ -0.91
HERC4-207ENST00000460168 APH1BQ8WW43 257 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 MISP3Q96FF7 219 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 HYLS1Q96M11 299 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 IL4I1Q96RQ9 567 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 RTN4RQ9BZR6 473 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 METTL8Q9H825 291 aaKnown RBP9.39□□□□□ -0.91
HERC4-207ENST00000460168 GHRLQ9UBU3 117 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 CLEC2DQ9UHP7 191 aa9.39□□□□□ -0.91
HERC4-207ENST00000460168 A0A1W2PPQ1 181 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 SLC43A1O75387 559 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 RAF1P04049 648 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 RAB40ALP0C0E4 278 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 RBM34P42696 430 aaKnown RBP9.38□□□□□ -0.91
HERC4-207ENST00000460168 SLC6A8P48029 635 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 PRKCDQ05655 676 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 HNF4GQ14541 408 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 PNLIPRP3Q17RR3 467 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 SMIM15Q7Z3B0 74 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 YIPF7Q8N8F6 280 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 NLGN4YQ8NFZ3 816 aaPredicted RBP9.38□□□□□ -0.91
HERC4-207ENST00000460168 THRSPQ92748 146 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 IMMP1LQ96LU5 166 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 ZNF426Q9BUY5 554 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 SPRY4Q9C004 299 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 LAT2Q9GZY6 243 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 ZNF160Q9HCG1 818 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 MEPEQ9NQ76 525 aaPredicted RBP9.38□□□□□ -0.91
HERC4-207ENST00000460168 ZNF226Q9NYT6 803 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 TVP23BQ9NYZ1 205 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 UBQLN2Q9UHD9 624 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 ADAM30Q9UKF2 790 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 FARSAQ9Y285 508 aaKnown RBP9.38□□□□□ -0.91
HERC4-207ENST00000460168 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
HERC4-207ENST00000460168 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
HERC4-207ENST00000460168 C17orf51A8MQB3 221 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 M0QZK8 103 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 SOCS6O14544 535 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 KLF4O43474 513 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 FADS1O60427 444 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 EIF4E2O60573 245 aaKnown RBP9.37□□□□□ -0.91
HERC4-207ENST00000460168 GABARAPO95166 117 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 CELA2AP08217 269 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 CRYZQ08257 329 aaKnown RBP9.37□□□□□ -0.91
HERC4-207ENST00000460168 ECH1Q13011 328 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 CDNFQ49AH0 187 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 ZNF620Q6ZNG0 422 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 NDUFAF7Q7L592 441 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 LHFPL4Q7Z7J7 247 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 POMGNT2Q8NAT1 580 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 ELOA3Q8NG57 546 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 OSTF1Q92882 214 aa9.37□□□□□ -0.91
HERC4-207ENST00000460168 C3orf49Q96BT1 292 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms