RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MT-ND5P03915 603 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 IGFBP1P08833 259 aaPredicted RBP8.6□□□□□ -1.03
HDLBP-228ENST00000459788 ADRA2AP08913 450 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 CST2P09228 141 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 IFI30P13284 250 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 TNFRSF1BP20333 461 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 ACHEP22303 614 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 APLNRP35414 380 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 LIPAP38571 399 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 GSK3BP49841 420 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 SLC7A2P52569 658 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 UCP2P55851 309 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 DGCR6Q14129 220 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 GGTLC2Q14390 218 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 IQCCQ4KMZ1 466 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 SLC25A47Q6Q0C1 308 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 MBOAT2Q6ZWT7 520 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 RRM2BQ7LG56 351 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 OAFQ86UD1 273 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 ALDH16A1Q8IZ83 802 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 POU5F2Q8N7G0 328 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 LRRC75AQ8NAA5 344 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 C11orf40Q8WZ69 217 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 HTRA1Q92743 480 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 RDH5Q92781 318 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 SH3GL3Q99963 347 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 ZNF416Q9BWM5 594 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 BEX2Q9BXY8 128 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 BPESC1Q9GZL8 116 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 SHARPINQ9H0F6 387 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 NSRP1Q9H0G5 558 aaKnown RBP8.6□□□□□ -1.03
HDLBP-228ENST00000459788 MYLK2Q9H1R3 596 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 CCNB1IP1Q9NPC3 277 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 SPAG4Q9NPE6 437 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 KRCC1Q9NPI7 259 aaPredicted RBP8.6□□□□□ -1.03
HDLBP-228ENST00000459788 SAMD4AQ9UPU9 718 aaKnown RBP8.6□□□□□ -1.03
HDLBP-228ENST00000459788 UGT2A1Q9Y4X1 527 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 ENPP4Q9Y6X5 453 aa8.6□□□□□ -1.03
HDLBP-228ENST00000459788 IGHV4-61A0A0C4DH41 118 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 LOC100289279A0A1B0GTE1 492 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 EFCAB9A8MZ26 197 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 FFAR1O14842 300 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 LILRA1O75019 489 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 GMNNO75496 209 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 LY6HO94772 140 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 IGHV3-13P01766 116 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 SAGP10523 405 aaPredicted RBP8.59□□□□□ -1.03
HDLBP-228ENST00000459788 COX5BP10606 129 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 ITGA2P17301 1181 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 RHCEP18577 417 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 KLF3P57682 345 aaPredicted RBP8.59□□□□□ -1.03
HDLBP-228ENST00000459788 CTXN1P60606 82 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 TEKQ02763 1124 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 HSF2Q03933 536 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 RUNX1T1Q06455 604 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 CD47Q08722 323 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 LAPTM4AQ15012 233 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 GPR139Q6DWJ6 353 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 ARL9Q6T311 187 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 FKBP9P1Q75LS8 142 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 CXXC5Q7LFL8 322 aaKnown RBP8.59□□□□□ -1.03
HDLBP-228ENST00000459788 VTCN1Q7Z7D3 282 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 NRMQ8IXM6 262 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 ARIH2OSQ8N7S6 290 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 SYT14Q8NB59 555 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 MOSPD2Q8NHP6 518 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 FGFBP3Q8TAT2 258 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 SYNPRQ8TBG9 265 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 SNX33Q8WV41 574 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 IPCEF1Q8WWN9 437 aaPredicted RBP8.59□□□□□ -1.03
HDLBP-228ENST00000459788 HDAC2Q92769 488 aaKnown RBP8.59□□□□□ -1.03
HDLBP-228ENST00000459788 NABP1Q96AH0 204 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 MSI2Q96DH6 328 aaKnown RBP8.59□□□□□ -1.03
HDLBP-228ENST00000459788 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 KCTD14Q9BQ13 255 aaPredicted RBP8.59□□□□□ -1.03
HDLBP-228ENST00000459788 GORASP2Q9H8Y8 452 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 CYSLTR2Q9NS75 346 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 FAM32AQ9Y421 112 aaKnown RBP8.59□□□□□ -1.03
HDLBP-228ENST00000459788 TIMM10BQ9Y5J6 103 aa8.59□□□□□ -1.03
HDLBP-228ENST00000459788 A0A087WUU8 490 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 C12orf71A8MTZ7 269 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 C17orf100A8MU93 164 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 J3QW42 95 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 SHOX2O60902 331 aaPredicted RBP8.58□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF682O95780 498 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 SERPINA1P01009 418 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 TFP02787 698 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 ADH4P08319 380 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 CD14P08571 375 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 MAKP20794 623 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 MSR1P21757 451 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 STOMP27105 288 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 NUDT2P50583 147 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 SMIM11AP58511 58 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 PSME3P61289 254 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 FHL1Q13642 323 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 CARTPTQ16568 116 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 MSMPQ1L6U9 139 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF718Q3SXZ3 478 aa8.58□□□□□ -1.04
HDLBP-228ENST00000459788 ZBED5Q49AG3 693 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms