RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 BCL2A1Q16548 175 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 WIPI1Q5MNZ9 446 aaPredicted RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 THEM4Q5T1C6 240 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 ZNF544Q6NX49 715 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 PLEKHG7Q6ZR37 379 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 SLC16A12Q6ZSM3 486 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 USP43Q70EL4 1123 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 TUBA1AQ71U36 451 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 KCTD20Q7Z5Y7 419 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 LHFPL3Q86UP9 236 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 ZBTB46Q86UZ6 589 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 ATCAYQ86WG3 371 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 PM20D2Q8IYS1 436 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 ZADH2Q8N4Q0 377 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 GALNT11Q8NCW6 608 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 NOXO1Q8NFA2 376 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 OR6X1Q8NH79 312 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 OR2V1Q8NHB1 315 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 SSC4DQ8WTU2 575 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 SNX33Q8WV41 574 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 ASB17Q8WXJ9 295 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 INTS12Q96CB8 462 aaKnown RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 SLC25A44Q96H78 314 aaPredicted RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 OPALINQ96PE5 141 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 WDR76Q9H967 626 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 SRA1Q9HD15 236 aaKnown RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 CLEC2DQ9UHP7 191 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 STUB1Q9UNE7 303 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 SSR3Q9UNL2 185 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 ZFHX3Q15911 3703 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 ESPL1Q14674 2120 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TNRC6AQ8NDV7 1962 aaKnown RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 NF1P21359 2839 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 APCP25054 2843 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 A0A0J9YW62 118 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 A0A1W2PQL4 384 aaPredicted RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 PINLYPA6NC86 204 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TRIM64BA6NI03 449 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 H7C1C5 153 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 K7EM74 188 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TNFSF11O14788 317 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TRAF3IP2O43734 574 aaPredicted RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 SLC16A7O60669 478 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TMCC2O75069 709 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 SYNGR4O95473 234 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 HRGP04196 525 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 RFPL3SP0C7P2 107 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 ZNF823P16415 610 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 GALP22466 123 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 GADD45AP24522 165 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 SHC1P29353 583 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 NAA10P41227 235 aaPredicted RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 GUCA1AP43080 201 aaPredicted RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 P2RY4P51582 365 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 GFRA1P56159 465 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 LCN6P62502 163 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 PPIAP62937 165 aaKnown RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 H3F3AP84243 136 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 EGR3Q06889 387 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TPBGQ13641 420 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 SLC10A1Q14973 349 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 CTF1Q16619 201 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 LINC01590Q5TEZ4 76 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 OR2G6Q5TZ20 316 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 CHMP1BQ7LBR1 199 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 GHDCQ8N2G8 530 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TMEM251Q8N6I4 163 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 FDCSPQ8NFU4 85 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 OR10H5Q8NGA6 315 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 OR51L1Q8NGJ5 315 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 OR6N2Q8NGY6 317 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 ZPLD1Q8TCW7 415 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 SPRYD4Q8WW59 207 aaPredicted RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 GATAD2BQ8WXI9 593 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TBX5Q99593 518 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 SMAD5Q99717 465 aaKnown RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 TTYH2Q9BSA4 534 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 NUAK2Q9H093 628 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TSPAN10Q9H1Z9 355 aaPredicted RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 KCNN2Q9H2S1 579 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 RERGLQ9H628 205 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 EXO5Q9H790 373 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 MARCH7Q9H992 704 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 ACKR4Q9NPB9 350 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 B3GAT2Q9NPZ5 323 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 BABAM2Q9NXR7 383 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 KLHL9Q9P2J3 617 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 B3GAT1Q9P2W7 334 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 KCNG2Q9UJ96 466 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 LAMP5Q9UJQ1 280 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 MCTS1Q9ULC4 181 aaKnown RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 B9D1Q9UPM9 204 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 RCE1Q9Y256 329 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 TP53TG5Q9Y2B4 290 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 GSTK1Q9Y2Q3 226 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 PCDHGA9Q9Y5G4 932 aaKnown RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 KCNMB2Q9Y691 235 aa7.97□□□□□ -1.13
VPS50-207ENST00000458530 PRRC2CQ9Y520 2896 aaKnown RBP7.97□□□□□ -1.13
VPS50-207ENST00000458530 IGLV1-36A0A0B4J1U3 117 aa7.96□□□□□ -1.14
VPS50-207ENST00000458530 LOC100506127A0A0U1RQW1 187 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms