RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 LIMS1P48059 325 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 CENPAP49450 140 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 PLP2Q04941 152 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 TNK1Q13470 666 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 TRIM25Q14258 630 aaKnown RBP16.17■□□□□ 0.18
USP39-209ENST00000458268 ADIPOQQ15848 244 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 MESTQ5EB52 335 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 MTX3Q5HYI7 312 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 C10orf128Q5T292 105 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 SLC25A47Q6Q0C1 308 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 THSD4Q6ZMP0 1018 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 IL17RDQ8NFM7 739 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 DHRS1Q96LJ7 313 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 GPA33Q99795 319 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 MUC13Q9H3R2 512 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 DYNLRB1Q9NP97 96 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 IL1RAPQ9NPH3 570 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 DLL4Q9NR61 685 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 FZR1Q9UM11 496 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 SPEF1Q9Y4P9 236 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 UGT2A1Q9Y4X1 527 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 ARFGEF3Q5TH69 2177 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 RNF223E7ERA6 249 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 TNFRSF11BO00300 401 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 ERFP50548 548 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 FAM98BQ52LJ0 330 aaKnown RBP16.16■□□□□ 0.18
USP39-209ENST00000458268 THEM4Q5T1C6 240 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 OTPQ5XKR4 325 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 LCN8Q6JVE9 175 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 CLEC9AQ6UXN8 241 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 ZER1Q7Z7L7 766 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.16■□□□□ 0.18
USP39-209ENST00000458268 SLC30A7Q8NEW0 376 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 PLK3Q9H4B4 646 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 FBXL3Q9UKT7 428 aa16.16■□□□□ 0.18
USP39-209ENST00000458268 TCRBV5S2A0A599 114 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 B9A039 149 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 SERPINA5P05154 406 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 FOSL1P15407 271 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 ZNF32P17041 273 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 APEX1P27695 318 aaKnown RBP16.15■□□□□ 0.18
USP39-209ENST00000458268 LAP3P28838 519 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 APLNRP35414 380 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 IFNGR2P38484 337 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 MRPS34P82930 218 aaKnown RBP16.15■□□□□ 0.18
USP39-209ENST00000458268 PABPC1L2AQ5JQF8 200 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 SMARCD3Q6STE5 483 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 ZNF584Q8IVC4 421 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 ZNF525Q8N782 197 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 NUP37Q8NFH4 326 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 OR9Q2Q8NGE9 314 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 AKR7LQ8NHP1 331 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 NMD3Q96D46 503 aaKnown RBP16.15■□□□□ 0.18
USP39-209ENST00000458268 ZNF75AQ96N20 296 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 ERMAPQ96PL5 475 aaPredicted RBP16.15■□□□□ 0.18
USP39-209ENST00000458268 SYT3Q9BQG1 590 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 IFT27Q9BW83 186 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 TRIM15Q9C019 465 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 GRIP2Q9C0E4 1043 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 OR52D1Q9H346 318 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 SIAEQ9HAT2 523 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 SMURF2Q9HAU4 748 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 EMC7Q9NPA0 242 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 CMAHPQ9Y471 501 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 U3KQV3 271 aa16.15■□□□□ 0.18
USP39-209ENST00000458268 SLC22A23A1A5C7 686 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 IMPA2O14732 288 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 PTP4A3O75365 173 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 NR4A1P22736 598 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 SDHAP31040 664 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 SLC6A6P31641 620 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 RPS6KA3P51812 740 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 ETFDHQ16134 617 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 TBC1D28Q2M2D7 210 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 MST1LQ2TV78 715 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 DNAL1Q4LDG9 190 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 CLEC2AQ6UVW9 174 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 BIVMQ86UB2 503 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 JAZF1Q86VZ6 243 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 PAQR4Q8N4S7 273 aaPredicted RBP16.14■□□□□ 0.17
USP39-209ENST00000458268 FNDC8Q8TC99 324 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 GNPDA2Q8TDQ7 276 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 NABP1Q96AH0 204 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 ASB9Q96DX5 294 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 COX4I2Q96KJ9 171 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 SAMD8Q96LT4 415 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 SORCS2Q96PQ0 1159 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 FUZQ9BT04 418 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 SYT4Q9H2B2 425 aa16.14■□□□□ 0.17
USP39-209ENST00000458268 PRSS37A4D1T9 235 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 H7C417 338 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 SLC16A7O60669 478 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 CCNB2O95067 398 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 LCKP06239 509 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 NOS3P29474 1203 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 ZNF133P52736 654 aaPredicted RBP16.13■□□□□ 0.17
USP39-209ENST00000458268 FXYD6P3P58550 94 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 SWI5Q1ZZU3 235 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 CLEC12AQ5QGZ9 265 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 GPR139Q6DWJ6 353 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms