RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 FAM69BQ5VUD6 431 aa11.22□□□□□ -0.61
LINC00959-201ENST00000456581 ULK3Q6PHR2 472 aa11.22□□□□□ -0.61
LINC00959-201ENST00000456581 UNQ9370/PRO34162Q6UXP9 181 aa11.22□□□□□ -0.61
LINC00959-201ENST00000456581 LINC00114Q6XXX2 140 aa11.22□□□□□ -0.61
LINC00959-201ENST00000456581 C17orf107Q6ZR85 190 aa11.22□□□□□ -0.61
LINC00959-201ENST00000456581 SLC35D2Q76EJ3 337 aa11.22□□□□□ -0.61
LINC00959-201ENST00000456581 S100A16Q96FQ6 103 aaKnown RBP11.22□□□□□ -0.61
LINC00959-201ENST00000456581 ADAD1Q96M93 576 aaKnown RBP11.22□□□□□ -0.61
LINC00959-201ENST00000456581 TCF7L1Q9HCS4 588 aa11.22□□□□□ -0.61
LINC00959-201ENST00000456581 MKKSQ9NPJ1 570 aaPredicted RBP11.22□□□□□ -0.61
LINC00959-201ENST00000456581 TMEM272A0A1B0GTI8 110 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 A0A1B0GUH1 482 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 MFSD2BA6NFX1 497 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 GOSR2O14653 212 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 SPDEFO95238 335 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 HPGDP15428 266 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 NFYAP23511 347 aaPredicted RBP11.21□□□□□ -0.61
LINC00959-201ENST00000456581 EPHA4P54764 986 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 ARHGAP40Q5TG30 622 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 METTL11BQ5VVY1 283 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 RGS7BPQ6MZT1 257 aaPredicted RBP11.21□□□□□ -0.61
LINC00959-201ENST00000456581 DPY19L4Q7Z388 723 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 ADGRG3Q86Y34 549 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 D2HGDHQ8N465 521 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 POMGNT2Q8NAT1 580 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 LSM14AQ8ND56 463 aaKnown RBP11.21□□□□□ -0.61
LINC00959-201ENST00000456581 OR52H1Q8NGJ2 320 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 OR4C16Q8NGL9 310 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 ACTR6Q9GZN1 396 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 RAB33BQ9H082 229 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 EXOSC3Q9NQT5 275 aaKnown RBP11.21□□□□□ -0.61
LINC00959-201ENST00000456581 SLC22A11Q9NSA0 550 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 RXFP3Q9NSD7 469 aa11.21□□□□□ -0.61
LINC00959-201ENST00000456581 IGKV3D-11A0A0A0MRZ8 115 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 CTDSPLO15194 276 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 UPK3AO75631 287 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 AKR7A3O95154 331 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 PLGP00747 810 aaPredicted RBP11.21□□□□□ -0.62
LINC00959-201ENST00000456581 MST1P26927 711 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 ARSKQ6UWY0 536 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF550Q7Z398 422 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 DND1Q8IYX4 353 aaKnown RBP11.21□□□□□ -0.62
LINC00959-201ENST00000456581 OR6N2Q8NGY6 317 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF721Q8TF20 911 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 TMEM106AQ96A25 262 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 C3orf49Q96BT1 292 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 VN1R1Q9GZP7 353 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 ARL6Q9H0F7 186 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 WDR13Q9H1Z4 485 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF304Q9HCX3 659 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 SLC6A5Q9Y345 797 aa11.21□□□□□ -0.62
LINC00959-201ENST00000456581 PATE3B3GLJ2 98 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 CREBL2O60519 120 aaPredicted RBP11.2□□□□□ -0.62
LINC00959-201ENST00000456581 ICOSLGO75144 302 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 IFI6P09912 130 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 FBLP22087 321 aaKnown RBP11.2□□□□□ -0.62
LINC00959-201ENST00000456581 NR0B1P51843 470 aaKnown RBP11.2□□□□□ -0.62
LINC00959-201ENST00000456581 ART1P52961 327 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 LTBQ06643 244 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 SERTAD2Q14140 314 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 GGTLC2Q14390 218 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 KLHL26Q53HC5 615 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 C1QL3Q5VWW1 255 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 TMEM205Q6UW68 189 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 C9orf40Q8IXQ3 194 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 MUC20Q8N307 709 aaPredicted RBP11.2□□□□□ -0.62
LINC00959-201ENST00000456581 OR51S1Q8NGJ8 323 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 OR5AK2Q8NH90 309 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 THAP3Q8WTV1 239 aaPredicted RBP11.2□□□□□ -0.62
LINC00959-201ENST00000456581 MARC2Q969Z3 335 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF501Q96CX3 271 aaPredicted RBP11.2□□□□□ -0.62
LINC00959-201ENST00000456581 SLC41A2Q96JW4 573 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 OR2M5A3KFT3 312 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 WNT11O96014 354 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 RLN2P04090 185 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 IGKV3-11P04433 115 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 APEHP13798 732 aaKnown RBP11.2□□□□□ -0.62
LINC00959-201ENST00000456581 RAG2P55895 527 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 TOMM34Q15785 309 aaPredicted RBP11.2□□□□□ -0.62
LINC00959-201ENST00000456581 FAM69AQ5T7M9 428 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF626Q68DY1 528 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 MDGA2Q7Z553 956 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 FAM219AQ8IW50 185 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 OR6V1Q8N148 313 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 ADAMTS18Q8TE60 1221 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 HAVCR1Q96D42 359 aa11.2□□□□□ -0.62
LINC00959-201ENST00000456581 A0A087WUJ7 227 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 A0A1W2PQM1 296 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 UTS2O95399 124 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 PLATP00750 562 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 ACHEP22303 614 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 ARRB1P49407 418 aaPredicted RBP11.19□□□□□ -0.62
LINC00959-201ENST00000456581 CTXN1P60606 82 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 ZNF684Q5T5D7 378 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 LYSMD4Q5XG99 296 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 LRFN4Q6PJG9 635 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 LRRTM1Q86UE6 522 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 PRSS35Q8N3Z0 413 aa11.19□□□□□ -0.62
LINC00959-201ENST00000456581 PLPP7Q8NBV4 271 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms