RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 DPPA2Q7Z7J5 298 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 RANBP3LQ86VV4 465 aaPredicted RBP10.06□□□□□ -0.8
LMCD1-206ENST00000456506 ARMC8Q8IUR7 673 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 BPIFB2Q8N4F0 458 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 C10orf53Q8N6V4 93 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 SIGLECL1Q8N7X8 197 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 SMYD1Q8NB12 490 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 OR1J1Q8NGS3 322 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 SNX33Q8WV41 574 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 IPCEF1Q8WWN9 437 aaPredicted RBP10.06□□□□□ -0.8
LMCD1-206ENST00000456506 POM121L2Q96KW2 1035 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 PCDHAC1Q9H158 963 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 SAP30LQ9HAJ7 183 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 CDH20Q9HBT6 801 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 MEPEQ9NQ76 525 aaPredicted RBP10.06□□□□□ -0.8
LMCD1-206ENST00000456506 MMP26Q9NRE1 261 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 NKIRAS1Q9NYS0 192 aa10.06□□□□□ -0.8
LMCD1-206ENST00000456506 POLR3KQ9Y2Y1 108 aaPredicted RBP10.06□□□□□ -0.8
LMCD1-206ENST00000456506 IGKV1D-43A0A0B4J1Z2 117 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 DNAJC9-AS1A6NH13 148 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 TRAPPC2LH3BP13 241 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 FARS2O95363 451 aaKnown RBP10.05□□□□□ -0.8
LMCD1-206ENST00000456506 IGHV2-70P01814 119 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 CD247P20963 164 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 PPIBP23284 216 aaKnown RBP10.05□□□□□ -0.8
LMCD1-206ENST00000456506 PRTN3P24158 256 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 ZNF81P51508 661 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 UGT2B15P54855 530 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 LCN2P80188 198 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 FOXL1Q12952 345 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 HFEQ30201 348 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 SLC36A2Q495M3 483 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 PABPC1L2AQ5JQF8 200 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 ARMC4Q5T2S8 1044 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 RFPL4BQ6ZWI9 263 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 SLC16A14Q7RTX9 510 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 BCL6BQ8N143 479 aaPredicted RBP10.05□□□□□ -0.8
LMCD1-206ENST00000456506 RBM15BQ8NDT2 890 aaKnown RBP10.05□□□□□ -0.8
LMCD1-206ENST00000456506 HIPK4Q8NE63 616 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 NOXO1Q8NFA2 376 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 OR1J2Q8NGS2 313 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 ADAMTS16Q8TE57 1224 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 ASB10Q8WXI3 467 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 RAB1CQ92928 201 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 ELMOD3Q96FG2 381 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 ZNF607Q96SK3 696 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 NTN4Q9HB63 628 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 NANSQ9NR45 359 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 INTS9Q9NV88 658 aaKnown RBP10.05□□□□□ -0.8
LMCD1-206ENST00000456506 SELENONQ9NZV5 590 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 ZNF69Q9UC07 566 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 ZNF229Q9UJW7 825 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 USH1CQ9Y6N9 552 aa10.05□□□□□ -0.8
LMCD1-206ENST00000456506 CPSF4LA6NMK7 179 aaKnown RBP10.04□□□□□ -0.8
LMCD1-206ENST00000456506 CENPBD1B2RD01 187 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 RNF13O43567 381 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 SERPINB7O75635 380 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 TRMUO75648 421 aaKnown RBP10.04□□□□□ -0.8
LMCD1-206ENST00000456506 OR6A2O95222 327 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 IGHG1P01857 330 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 OPN1SWP03999 348 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 CD55P08174 381 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 ZNF32P17041 273 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 SLC6A2P23975 617 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 GYS2P54840 703 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 SELENOVP59797 346 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 MRPS34P82930 218 aaKnown RBP10.04□□□□□ -0.8
LMCD1-206ENST00000456506 RPL18Q07020 188 aaKnown RBP10.04□□□□□ -0.8
LMCD1-206ENST00000456506 RUNDC3AQ59EK9 446 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 THEM4Q5T1C6 240 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 MBNL2Q5VZF2 373 aaKnown RBP10.04□□□□□ -0.8
LMCD1-206ENST00000456506 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 LRRC18Q8N456 261 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 SLC25A40Q8TBP6 338 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 KLF14Q8TD94 323 aaPredicted RBP10.04□□□□□ -0.8
LMCD1-206ENST00000456506 GAL3ST1Q99999 423 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 EBF4Q9BQW3 602 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 SLC19A3Q9BZV2 496 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 RNF121Q9H920 327 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 NPHS2Q9NP85 383 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 DECR2Q9NUI1 292 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 DDX28Q9NUL7 540 aaKnown RBP10.04□□□□□ -0.8
LMCD1-206ENST00000456506 CCDC167Q9P0B6 97 aa10.04□□□□□ -0.8
LMCD1-206ENST00000456506 IQCMA0A1B0GVH7 501 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 A8MXK9 166 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 F5H0A9 414 aaPredicted RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 M0QX08 132 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 KPNA4O00629 521 aaPredicted RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SPRY3O43610 288 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 ENTPD5O75356 428 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 SLC2A10O95528 541 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 NGFP01138 241 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 PTHP01270 115 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 F13BP05160 661 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 RNASE1P07998 156 aaKnown RBP10.03□□□□□ -0.8
LMCD1-206ENST00000456506 ACADSP16219 412 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 ZNF12P17014 697 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 FPR2P25090 351 aa10.03□□□□□ -0.8
LMCD1-206ENST00000456506 STOMP27105 288 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms